RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SLC25A2Q9BXI2 301 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 DYNLRB1Q9NP97 96 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 CLEC5AQ9NY25 188 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 RNF24Q9Y225 148 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 DYSFO75923 2080 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 DSCAML1Q8TD84 2053 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 HCFC1P51610 2035 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 DIDO1Q9BTC0 2240 aaKnown RBP8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 IGKV1OR2-108A0A075B7D4 117 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 MUC21A0A0G2JKD1 596 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 MUC21A0A140T8X8 626 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 GAGE12BA1L429 117 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 PSMB11A5LHX3 300 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 PEX7O00628 323 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 LIPFP07098 398 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 COL8A2P25067 703 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 GPR6P46095 362 aaPredicted RBP8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 UBE2L3P68036 154 aaKnown RBP8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 HBBP68871 147 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 PSG9Q00887 426 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 FBXL19-AS1Q494R0 122 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 CT83Q5H943 113 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 MUC21Q5SSG8 566 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 ZNF329Q86UD4 541 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 C8orf31Q8N9H6 132 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 OR1L8Q8NGR8 309 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 CACNG8Q8WXS5 425 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 RNASE6Q93091 150 aaKnown RBP8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 KAAG1Q9UBP8 84 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 DSCAMO60469 2012 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 IGHV1-24A0A0C4DH33 117 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 B9A039 149 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 NDUFB3O43676 98 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 CD3EP07766 207 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 APOBEC3AP31941 199 aaPredicted RBP8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 ARF6P62330 175 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 ST6GALNAC6Q969X2 333 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 PLPPR2Q96GM1 343 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 MAP1LC3CQ9BXW4 147 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 CHTOPQ9Y3Y2 248 aaKnown RBP8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 CUL9Q8IWT3 2517 aa8.71□□□□□ -1.02
CHRNA1-201ENST00000261007 hDV102S1A0JD36 115 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 SHISA9B4DS77 424 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 UPK2O00526 184 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 APOA2P02652 100 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 IGLC1P0CG04 106 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 CAMPP49913 170 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 SEC11AP67812 179 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 TCF24Q7RTU0 167 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 OR1L4Q8NGR5 311 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 NDFIP1Q9BT67 221 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 SSBP4Q9BWG4 385 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 RAI1Q7Z5J4 1906 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 FSTL3O95633 263 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 FAM87AP0C7U9 286 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 CD69Q07108 199 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 KLRB1Q12918 225 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 PRR30Q53SZ7 412 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 DUX4L9Q6RFH8 374 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 ZNF833PQ6ZTB9 187 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 LINC00311Q8N616 119 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 OSR1Q8TAX0 266 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 LINC00479Q96M42 142 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 PAXXQ9BUH6 204 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 GFRA4Q9GZZ7 299 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 HSPB8Q9UJY1 196 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 KLF12Q9Y4X4 402 aa8.7□□□□□ -1.02
CHRNA1-201ENST00000261007 CADP27708 2225 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 RIF1Q5UIP0 2472 aaKnown RBP8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 FAM231BA6NCW3 169 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 A8MWL6 223 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 VWC2LB2RUY7 222 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 CORTO00230 105 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 TNFRSF13BO14836 293 aaPredicted RBP8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 GATA2P23769 480 aaPredicted RBP8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 GPR183P32249 361 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 MYCNOSP40205 109 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 H1FXQ92522 213 aaKnown RBP8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 DPF1Q92782 380 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 LEAP2Q969E1 77 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 PRSS22Q9GZN4 317 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 ZNF492Q9P255 531 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 ZGRF1Q86YA3 2104 aa8.69□□□□□ -1.02
CHRNA1-201ENST00000261007 TMEM238C9JI98 176 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 E7EQL1 145 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 IGHV3-7P01780 117 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 RNASE2P10153 161 aaKnown RBP8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 COX8AP10176 69 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 C1orf229Q6ZS94 237 aaPredicted RBP8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 GTF2H5Q6ZYL4 71 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 OR4A5Q8NH83 315 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 OR9G1Q8NH87 305 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 TMEM186Q96B77 213 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 HINT2Q9BX68 163 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 RPP21Q9H633 154 aaKnown RBP8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 TRAV5A0A0B4J249 113 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 TRAV8-6A0A0B4J262 113 aa8.68□□□□□ -1.02
CHRNA1-201ENST00000261007 TEX50A0A1B0GTY4 177 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms