RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PRR27Q6MZM9 219 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 ZNF841Q6ZN19 808 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 C18orf32Q8TCD1 76 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 BLNKQ8WV28 456 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 TRGV9Q99603 122 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 CHRDL1Q9BU40 450 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 DYNLRB1Q9NP97 96 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 AKAP13Q12802 2813 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 ZNF292O60281 2723 aa12.21□□□□□ -0.45
DDX56-201ENST00000258772 PGPA6NDG6 321 aa12.21□□□□□ -0.45
DDX56-201ENST00000258772 SLC25A5P05141 298 aaKnown RBP12.21□□□□□ -0.45
DDX56-201ENST00000258772 UBE2G1P62253 170 aa12.21□□□□□ -0.45
DDX56-201ENST00000258772 GDF5OSQ5U4N7 250 aa12.21□□□□□ -0.45
DDX56-201ENST00000258772 C1orf122Q6ZSJ8 110 aa12.21□□□□□ -0.45
DDX56-201ENST00000258772 LHFPL4Q7Z7J7 247 aa12.21□□□□□ -0.45
DDX56-201ENST00000258772 NIT1Q86X76 327 aa12.21□□□□□ -0.45
DDX56-201ENST00000258772 GVINP1Q7Z2Y8 2422 aa12.21□□□□□ -0.45
DDX56-201ENST00000258772 SHISA9B4DS77 424 aa12.21□□□□□ -0.46
DDX56-201ENST00000258772 E7EQL1 145 aa12.21□□□□□ -0.46
DDX56-201ENST00000258772 HIST1H1EP10412 219 aaKnown RBP12.21□□□□□ -0.46
DDX56-201ENST00000258772 RPL27AP46776 148 aaKnown RBP12.21□□□□□ -0.46
DDX56-201ENST00000258772 GFRALQ6UXV0 394 aa12.21□□□□□ -0.46
DDX56-201ENST00000258772 SPACA3Q8IXA5 215 aa12.21□□□□□ -0.46
DDX56-201ENST00000258772 FAM19A2Q8N3H0 131 aa12.21□□□□□ -0.46
DDX56-201ENST00000258772 TMEM116Q8NCL8 245 aa12.21□□□□□ -0.46
DDX56-201ENST00000258772 OR4B1Q8NGF8 309 aa12.21□□□□□ -0.46
DDX56-201ENST00000258772 MRPL27Q9P0M9 148 aaKnown RBP12.21□□□□□ -0.46
DDX56-201ENST00000258772 KLF12Q9Y4X4 402 aa12.21□□□□□ -0.46
DDX56-201ENST00000258772 NBEAP1P0C6P0 100 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 CNTFRP26992 372 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 PRRX1P54821 245 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 TNXAQ16473 311 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 C19orf35Q6ZS72 473 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 SGK494Q96LW2 274 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 PPP1R14DQ9NXH3 145 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 ANKRD11Q6UB99 2663 aaPredicted RBP12.2□□□□□ -0.46
DDX56-201ENST00000258772 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 CORTO00230 105 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 CRYGBP07316 175 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 C3orf79P0CE67 100 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 APELAP0DMC3 54 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 C22orf15Q8WYQ4 148 aa12.2□□□□□ -0.46
DDX56-201ENST00000258772 IGHV3-21A0A0B4J1V1 117 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 HYPMO75409 117 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 CTRLP40313 264 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 Q8NA96 180 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 PRSS33Q8NF86 280 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 SMIM12Q96EX1 92 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 GPR82Q96P67 336 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 APC2O95996 2303 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 IGHV1-69-2A0A0G2JMI3 117 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 DLX1P56177 255 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 TNFRSF14Q92956 283 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 MLST8Q9BVC4 326 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 SIGLEC9Q9Y336 463 aa12.19□□□□□ -0.46
DDX56-201ENST00000258772 IGHV2-26A0A0B4J1V2 119 aa12.18□□□□□ -0.46
DDX56-201ENST00000258772 IGLV1-47P01700 117 aa12.18□□□□□ -0.46
DDX56-201ENST00000258772 NTF3P20783 257 aa12.18□□□□□ -0.46
DDX56-201ENST00000258772 NGBQ9NPG2 151 aa12.18□□□□□ -0.46
DDX56-201ENST00000258772 RPH3ALQ9UNE2 315 aa12.18□□□□□ -0.46
DDX56-201ENST00000258772 ZNF835Q9Y2P0 537 aa12.18□□□□□ -0.46
DDX56-201ENST00000258772 FAM87AP0C7U9 286 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 PLP1P60201 277 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 KLF5Q13887 457 aaPredicted RBP12.17□□□□□ -0.46
DDX56-201ENST00000258772 BORCS7Q96B45 105 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 SSBP4Q9BWG4 385 aaPredicted RBP12.17□□□□□ -0.46
DDX56-201ENST00000258772 INSIG2Q9Y5U4 225 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 OR2J3O76001 311 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 RPLP1P05386 114 aaKnown RBP12.17□□□□□ -0.46
DDX56-201ENST00000258772 GP9P14770 177 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 G0S2P27469 103 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 CA7P43166 264 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 CAMPP49913 170 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 CASP6P55212 293 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 PRB3Q04118 309 aaPredicted RBP12.17□□□□□ -0.46
DDX56-201ENST00000258772 SPATA45Q537H7 98 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
DDX56-201ENST00000258772 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 C5orf17Q8NAS9 161 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 C8orf46Q8TAG6 207 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
DDX56-201ENST00000258772 RALYQ9UKM9 306 aaKnown RBP12.17□□□□□ -0.46
DDX56-201ENST00000258772 ADGRG4Q8IZF6 3080 aa12.17□□□□□ -0.46
DDX56-201ENST00000258772 IGHV1-3A0A0C4DH29 117 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 TOMM40O96008 361 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 GPR6P46095 362 aaPredicted RBP12.16□□□□□ -0.46
DDX56-201ENST00000258772 PAX2Q02962 417 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 ZNF124Q15973 351 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 LEMD1Q68G75 181 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 PRSS22Q9GZN4 317 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 GSX1Q9H4S2 264 aaPredicted RBP12.16□□□□□ -0.46
DDX56-201ENST00000258772 F11RQ9Y624 299 aaKnown RBP12.16□□□□□ -0.46
DDX56-201ENST00000258772 ATMQ13315 3056 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 A0A1B0GXF2 115 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
DDX56-201ENST00000258772 TMEM11P17152 192 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 APOBEC3AP31941 199 aaPredicted RBP12.16□□□□□ -0.46
DDX56-201ENST00000258772 PPP1R27Q86WC6 154 aa12.16□□□□□ -0.46
DDX56-201ENST00000258772 Q9H3A6 140 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms