RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 KLRB1Q12918 225 aa13.17□□□□□ -0.3
UBQLN1-201ENST00000257468 PRR27Q6MZM9 219 aa13.17□□□□□ -0.3
UBQLN1-201ENST00000257468 C8orf46Q8TAG6 207 aa13.17□□□□□ -0.3
UBQLN1-201ENST00000257468 C22orf15Q8WYQ4 148 aa13.17□□□□□ -0.3
UBQLN1-201ENST00000257468 NAT8BQ9UHF3 227 aa13.17□□□□□ -0.3
UBQLN1-201ENST00000257468 LIPFP07098 398 aa13.16□□□□□ -0.3
UBQLN1-201ENST00000257468 MYCNOSP40205 109 aa13.16□□□□□ -0.3
UBQLN1-201ENST00000257468 TAS2R60P59551 318 aa13.16□□□□□ -0.3
UBQLN1-201ENST00000257468 RAB4BP61018 213 aa13.16□□□□□ -0.3
UBQLN1-201ENST00000257468 BAGE2Q86Y30 109 aa13.16□□□□□ -0.3
UBQLN1-201ENST00000257468 TMEM136Q6ZRR5 245 aa13.16□□□□□ -0.3
UBQLN1-201ENST00000257468 LY6G5BQ8NDX9 201 aa13.16□□□□□ -0.3
UBQLN1-201ENST00000257468 COL6A6A6NMZ7 2263 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 SMIM27A0A1W2PRY6 76 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 PGPA6NDG6 321 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 HYPMO75409 117 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 RBP4P02753 201 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 SLC25A5P05141 298 aaKnown RBP13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 MMDQ15546 238 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 SSX2Q16385 188 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 MS4A10Q96PG2 267 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 FAM103A1Q9BTL3 118 aaKnown RBP13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 GNB1LQ9BYB4 327 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 SCGB1D1O95968 90 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 GP9P14770 177 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 LYZP61626 148 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 TPTE2P1Q5T6R2 138 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
UBQLN1-201ENST00000257468 CORTO00230 105 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 CNIH1O95406 144 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 NBEAP1P0C6P0 100 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 PSG1P11464 419 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 BAGE3Q86Y29 109 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 WNT10AQ9GZT5 417 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 EPDR1Q9UM22 224 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 SPTBN4Q9H254 2564 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 IGLC1P0CG04 106 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
UBQLN1-201ENST00000257468 I3L2K1 104 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 PRB4P10163 310 aaPredicted RBP13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 HTR1DP28221 377 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 Q6ZWC4 215 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 NUDT10Q8NFP7 164 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 NUDT11Q96G61 164 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 PAX1P15863 534 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 UBE2G1P62253 170 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 PRR31Q5SQ13 230 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 C11orf71Q6IPW1 123 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 CBLN4Q9NTU7 201 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 S4R3C0 116 aa13.13□□□□□ -0.31
UBQLN1-201ENST00000257468 TRBV9A0A0B4J1U6 114 aa13.12□□□□□ -0.31
UBQLN1-201ENST00000257468 GATCO43716 136 aaKnown RBP13.12□□□□□ -0.31
UBQLN1-201ENST00000257468 TOX4O94842 621 aa13.12□□□□□ -0.31
UBQLN1-201ENST00000257468 AMY1AP04745 511 aa13.12□□□□□ -0.31
UBQLN1-201ENST00000257468 IQCJQ1A5X6 159 aa13.12□□□□□ -0.31
UBQLN1-201ENST00000257468 KLF17Q5JT82 389 aaPredicted RBP13.12□□□□□ -0.31
UBQLN1-201ENST00000257468 CFHR4Q92496 578 aa13.12□□□□□ -0.31
UBQLN1-201ENST00000257468 MBD6Q96DN6 1003 aa13.12□□□□□ -0.31
UBQLN1-201ENST00000257468 C7orf69Q9H7B7 122 aa13.12□□□□□ -0.31
UBQLN1-201ENST00000257468 A8MWP6 167 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 TMEM183BQ1AE95 376 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 WDR73Q6P4I2 378 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 ZNF600Q6ZNG1 722 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 STXBP6Q8NFX7 210 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 RCHY1Q96PM5 261 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 DPM3Q9P2X0 92 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 HIGD1AQ9Y241 93 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 A0A1W2PPR1 153 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 Q71RC1 249 aaPredicted RBP13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 REC114Q7Z4M0 266 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 Q9H3A6 140 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 NAGKQ9UJ70 344 aa13.11□□□□□ -0.31
UBQLN1-201ENST00000257468 LOC105371242A0A075B767 164 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 BMPR1BO00238 502 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 NBR2O15453 112 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 IGKV1-17P01599 117 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 TPPP2P59282 170 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 PLP1P60201 277 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 Q0VG73 95 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 HES1Q14469 280 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 LINC00322Q6ZN03 302 aaPredicted RBP13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 OR11H6Q8NGC7 330 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 RASL11BQ9BPW5 248 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 POLR3KQ9Y2Y1 108 aaPredicted RBP13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 RNF114Q9Y508 228 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 K7EIM0 57 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 NDUFS7O75251 213 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 MT-ND6P03923 174 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 SRIP30626 198 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 CDKN1AP38936 164 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 PAX2Q02962 417 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 SLAQ13239 276 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 FAM231DQ6ZW35 169 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 NUP35Q8NFH5 326 aa13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
UBQLN1-201ENST00000257468 A6NNC1 897 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 ESDP10768 282 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms