RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 LOC389332A0A1B0GUA5 103 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 TNFRSF13BO14836 293 aaPredicted RBP8.16□□□□□ -1.1
COPB1-201ENST00000249923 PYYP10082 97 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 SFXN3Q9BWM7 321 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 ZFP30Q9Y2G7 519 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 LINC00312Q9Y6C7 94 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 CHEK1O14757 476 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 GPX1P07203 203 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 CA7P43166 264 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 COMPP49747 757 aaPredicted RBP8.16□□□□□ -1.1
COPB1-201ENST00000249923 PATE2Q6UY27 113 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 TCF24Q7RTU0 167 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 WFDC3Q8IUB2 231 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 NUP37Q8NFH4 326 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 OR8B3Q8NGG8 313 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 OR5AN1Q8NGI8 311 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 H1FXQ92522 213 aaKnown RBP8.16□□□□□ -1.1
COPB1-201ENST00000249923 FAM168AQ92567 244 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 SLC25A10Q9UBX3 287 aaPredicted RBP8.16□□□□□ -1.1
COPB1-201ENST00000249923 IGHV3-72A0A0B4J1Y9 119 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 CD69Q07108 199 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 TNXAQ16473 311 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 ADTRPQ96IZ2 230 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 PGLYRP4Q96LB8 373 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 SLC25A33Q9BSK2 321 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 CLEC7AQ9BXN2 247 aa8.16□□□□□ -1.1
COPB1-201ENST00000249923 MUC6Q6W4X9 2439 aa8.15□□□□□ -1.1
COPB1-201ENST00000249923 COX7A2P2O60397 106 aa8.15□□□□□ -1.1
COPB1-201ENST00000249923 SLC25A5P05141 298 aaKnown RBP8.15□□□□□ -1.1
COPB1-201ENST00000249923 BSPH1Q075Z2 132 aa8.15□□□□□ -1.1
COPB1-201ENST00000249923 S100A7AQ86SG5 101 aa8.15□□□□□ -1.1
COPB1-201ENST00000249923 FAM57AQ8TBR7 257 aa8.15□□□□□ -1.1
COPB1-201ENST00000249923 ZNF324O75467 553 aaPredicted RBP8.15□□□□□ -1.1
COPB1-201ENST00000249923 BTF3P20290 206 aaKnown RBP8.15□□□□□ -1.1
COPB1-201ENST00000249923 OR1L8Q8NGR8 309 aa8.15□□□□□ -1.1
COPB1-201ENST00000249923 HARBI1Q96MB7 349 aa8.15□□□□□ -1.1
COPB1-201ENST00000249923 A0A1W2PS18 150 aa8.15□□□□□ -1.11
COPB1-201ENST00000249923 C17orf100A8MU93 164 aa8.15□□□□□ -1.11
COPB1-201ENST00000249923 CHODLQ9H9P2 273 aa8.15□□□□□ -1.11
COPB1-201ENST00000249923 LY96Q9Y6Y9 160 aa8.15□□□□□ -1.11
COPB1-201ENST00000249923 KIR2DL5BA0A0G2JN68 375 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 KIR2DL5BA0A0G2JPC4 375 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 PSG1P11464 419 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 DLX6P56179 175 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
COPB1-201ENST00000249923 FBLN7Q53RD9 439 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 AMMECR1LQ6DCA0 310 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 KIR2DL5AQ8N109 375 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 Q8NA96 180 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 OR8A1Q8NGG7 326 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 COMMD5Q9GZQ3 224 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 HILPDAQ9Y5L2 63 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 PPIAL4DF5H284 164 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 CORTO00230 105 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 ESDP10768 282 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 RTL8BQ17RB0 113 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 HCP5Q6MZN7 132 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 Q8N976 141 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 KCNS1Q96KK3 526 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 SPG11Q96JI7 2443 aa8.14□□□□□ -1.11
COPB1-201ENST00000249923 A0A087X0K7 114 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 OR4C46A6NHA9 309 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 TMEM177Q53S58 311 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 WFDC8Q8IUA0 241 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 ZNF430Q9H8G1 570 aaPredicted RBP8.13□□□□□ -1.11
COPB1-201ENST00000249923 MAP1AP78559 2803 aaPredicted RBP8.13□□□□□ -1.11
COPB1-201ENST00000249923 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.13□□□□□ -1.113e-7■■■■□ 25.4
COPB1-201ENST00000249923 hADV38S2A0JD32 116 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 OR2T8A6NH00 312 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 TMEM178BH3BS89 294 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 SELENOVP59797 346 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 SLAQ13239 276 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 TMEM136Q6ZRR5 245 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 PNKDQ8N490 385 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 ZNF714Q96N38 554 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 CDC42EP3Q9UKI2 254 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 C22orf46C9J442 243 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 LOXP28300 417 aaPredicted RBP8.13□□□□□ -1.11
COPB1-201ENST00000249923 TSPOP30536 169 aa8.13□□□□□ -1.11
COPB1-201ENST00000249923 RELQ04864 619 aaPredicted RBP8.13□□□□□ -1.11
COPB1-201ENST00000249923 PRR30Q53SZ7 412 aaPredicted RBP8.13□□□□□ -1.11
COPB1-201ENST00000249923 Q71RC1 249 aaPredicted RBP8.13□□□□□ -1.11
COPB1-201ENST00000249923 OSR1Q8TAX0 266 aaPredicted RBP8.13□□□□□ -1.11
COPB1-201ENST00000249923 F11RQ9Y624 299 aaKnown RBP8.13□□□□□ -1.11
COPB1-201ENST00000249923 A0A1W2PPI3 338 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 VWC2LB2RUY7 222 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 MOSP00540 346 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 IGLC2P0DOY2 106 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 IGLC3P0DOY3 106 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 TNFSF4P23510 183 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 FCER1GP30273 86 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 CX3CL1P78423 397 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 TCF15Q12870 199 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 WDR73Q6P4I2 378 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 MALRD1Q5VYJ5 2156 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 HIGD1CA8MV81 97 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 CNTFRP26992 372 aa8.12□□□□□ -1.11
COPB1-201ENST00000249923 TAS2R45P59539 299 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms