RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 DNASE2O00115 360 aaPredicted RBP9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 CCSO14618 274 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 MED6O75586 246 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 IGHV3-48P01763 117 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 NPY1RP25929 384 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 OPRK1P41145 380 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 ZNF124Q15973 351 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 FAM90A2PQ658T7 463 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 TCF24Q7RTU0 167 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 C12orf45Q8N5I9 185 aaPredicted RBP9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 OR4D5Q8NGN0 318 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 MARVELD1Q9BSK0 173 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 MFFQ9GZY8 342 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 SYNGR2O43760 224 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 PRAF2O60831 178 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 DFFBO76075 338 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 IFNA10P01566 189 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 IAPPP10997 89 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 IAH1Q2TAA2 248 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 TOMM20LQ6UXN7 152 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 ZNF600Q6ZNG1 722 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 MAGT1Q9H0U3 335 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 C11orf68Q9H3H3 251 aaKnown RBP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 FNDC4Q9H6D8 234 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 TMEM231Q9H6L2 316 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 VSIRQ9H7M9 311 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 GPN1Q9HCN4 374 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 U3KQ87 197 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 SCGB2A1O75556 95 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 PTTG1O95997 202 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 IFNA4P05014 189 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 NKX2-1P43699 371 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 RPL11P62913 178 aaKnown RBP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 ID3Q02535 119 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 LGALS9CQ6DKI2 356 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 NOXA1Q86UR1 476 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 ZBTB8BQ8NAP8 495 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 OR11H2Q8NH07 326 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 RNASEH2CQ8TDP1 164 aaKnown RBP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 ST8SIA2Q92186 375 aa9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 CIB3Q96Q77 187 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 PUS1Q9Y606 427 aaKnown RBP eCLIP9.48□□□□□ -0.89
APOBEC3A-201ENST00000249116 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
APOBEC3A-201ENST00000249116 RPS10-NUDT3A0A1W2PQS6 291 aa9.47□□□□□ -0.89
APOBEC3A-201ENST00000249116 SNRPGP15A8MWD9 76 aa9.47□□□□□ -0.89
APOBEC3A-201ENST00000249116 CA1P00915 261 aaPredicted RBP9.47□□□□□ -0.89
APOBEC3A-201ENST00000249116 DEFB131AP59861 70 aa9.47□□□□□ -0.89
APOBEC3A-201ENST00000249116 POLR2GP62487 172 aaKnown RBP eCLIP9.47□□□□□ -0.89
APOBEC3A-201ENST00000249116 MS4A6AQ9H2W1 248 aa9.47□□□□□ -0.89
APOBEC3A-201ENST00000249116 MRPL36Q9P0J6 103 aaKnown RBP9.47□□□□□ -0.89
APOBEC3A-201ENST00000249116 A0A1W2PS18 150 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 C5orf51A6NDU8 294 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 FAM25EA8MYX2 175 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 WRBO00258 174 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 SSSCA1O60232 199 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 TMEM50AO95807 157 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 SCGB1D2O95969 90 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 NPPCP23582 126 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 ATP5IP56385 69 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 MLANAQ16655 118 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 RPP25LQ8N5L8 163 aaKnown RBP9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 GSKIPQ9P0R6 139 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 FBXL17Q9UF56 701 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 RABAC1Q9UI14 185 aa9.46□□□□□ -0.9
APOBEC3A-201ENST00000249116 IGHV3-66A0A0C4DH42 116 aa9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 CLN5O75503 358 aa9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 APOHP02749 345 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 SLC25A4P12235 298 aa9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 NANOS2P60321 138 aaKnown RBP9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 RAB11AP62491 216 aa9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 LEMD1Q68G75 181 aa9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 ETFRF1Q6IPR1 90 aa9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 PRSS54Q6PEW0 395 aa9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 STHQ8IWL8 128 aa9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 OR4X1Q8NH49 305 aa9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 NARS2Q96I59 477 aaKnown RBP9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 RCL1Q9Y2P8 373 aaKnown RBP9.45□□□□□ -0.9
APOBEC3A-201ENST00000249116 H3BP45 60 aa9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 DEDDO75618 318 aa9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 MBPP02686 304 aaPredicted RBP9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 RND2P52198 227 aa9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 TCTAP57738 103 aa9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 RPP30P78346 268 aaKnown RBP9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 GSG1LQ6UXU4 331 aa9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 LILRB2Q8N423 598 aa9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 C2CD4CQ8TF44 421 aa9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 C2orf50Q96LR7 162 aa9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 METTL26Q96S19 204 aa9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 PAIP2BQ9ULR5 123 aaKnown RBP9.44□□□□□ -0.9
APOBEC3A-201ENST00000249116 C7orf66A4D0T2 115 aa9.43□□□□□ -0.9
APOBEC3A-201ENST00000249116 GOSR2O14653 212 aa9.43□□□□□ -0.9
APOBEC3A-201ENST00000249116 TMEM41BQ5BJD5 291 aa9.43□□□□□ -0.9
APOBEC3A-201ENST00000249116 SPANXN5Q5MJ07 72 aa9.43□□□□□ -0.9
APOBEC3A-201ENST00000249116 STXBP6Q8NFX7 210 aa9.43□□□□□ -0.9
APOBEC3A-201ENST00000249116 PSENENQ9NZ42 101 aa9.43□□□□□ -0.9
APOBEC3A-201ENST00000249116 STRAPQ9Y3F4 350 aaKnown RBP9.43□□□□□ -0.9
APOBEC3A-201ENST00000249116 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
APOBEC3A-201ENST00000249116 PRSS46E5RG02 174 aa9.42□□□□□ -0.9
APOBEC3A-201ENST00000249116 K7EPK0 472 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms