RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 IGFBPL1Q8WX77 278 aa15.55■□□□□ 0.08
CDC42EP1-201ENST00000249014 ATRXP46100 2492 aa15.55■□□□□ 0.08
CDC42EP1-201ENST00000249014 HYPMO75409 117 aa15.55■□□□□ 0.08
CDC42EP1-201ENST00000249014 MRPL54Q6P161 138 aaKnown RBP15.55■□□□□ 0.08
CDC42EP1-201ENST00000249014 MS4A10Q96PG2 267 aa15.55■□□□□ 0.08
CDC42EP1-201ENST00000249014 ESDP10768 282 aa15.54■□□□□ 0.08
CDC42EP1-201ENST00000249014 ARF6P62330 175 aa15.54■□□□□ 0.08
CDC42EP1-201ENST00000249014 IQCJQ1A5X6 159 aa15.54■□□□□ 0.08
CDC42EP1-201ENST00000249014 SGK494Q96LW2 274 aa15.54■□□□□ 0.08
CDC42EP1-201ENST00000249014 EPDR1Q9UM22 224 aa15.54■□□□□ 0.08
CDC42EP1-201ENST00000249014 PGPA6NDG6 321 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 A8MWP6 167 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 NBEAP1P0C6P0 100 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 GP9P14770 177 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 PLP1P60201 277 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 Q0VG73 95 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 PLGLAQ15195 96 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 KIAA1644Q3SXP7 199 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 WDR73Q6P4I2 378 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 LURAP1LQ8IV03 231 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 MBD6Q96DN6 1003 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 RAB1BQ9H0U4 201 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 I3L2K1 104 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 SCGB1D1O95968 90 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 SLC25A5P05141 298 aaKnown RBP15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 IGLC1P0CG04 106 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 CD33P20138 364 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 UCNP55089 124 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 TMEM183BQ1AE95 376 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 TPTE2P1Q5T6R2 138 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 FAM231DQ6ZW35 169 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 REC114Q7Z4M0 266 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 RNF5Q99942 180 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 C7orf69Q9H7B7 122 aa15.53■□□□□ 0.08
CDC42EP1-201ENST00000249014 H3BTX0 84 aa15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 MT-ND6P03923 174 aa15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 PSG1P11464 419 aa15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 RPL19P84098 196 aaKnown RBP15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 BAGE3Q86Y29 109 aa15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 NUDT10Q8NFP7 164 aa15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 NUDT11Q96G61 164 aa15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 WNT10AQ9GZT5 417 aa15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 GNB4Q9HAV0 340 aa15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 HILPDAQ9Y5L2 63 aa15.52■□□□□ 0.08
CDC42EP1-201ENST00000249014 IZUMO1RA6ND01 250 aa15.52■□□□□ 0.07
CDC42EP1-201ENST00000249014 AMY1AP04745 511 aa15.52■□□□□ 0.07
CDC42EP1-201ENST00000249014 KLRD1Q13241 179 aa15.52■□□□□ 0.07
CDC42EP1-201ENST00000249014 MMDQ15546 238 aa15.52■□□□□ 0.07
CDC42EP1-201ENST00000249014 PRR27Q6MZM9 219 aa15.52■□□□□ 0.07
CDC42EP1-201ENST00000249014 Q6ZWC4 215 aa15.52■□□□□ 0.07
CDC42EP1-201ENST00000249014 HTR1DP28221 377 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 FBLN7Q53RD9 439 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 C11orf71Q6IPW1 123 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 OR11H6Q8NGC7 330 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 CBLN4Q9NTU7 201 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 RPH3ALQ9UNE2 315 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 CD24P25063 80 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 TPPP2P59282 170 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 PAFAH1B2P68402 229 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 CFHR4Q92496 578 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 NOL4LQ96MY1 436 aaPredicted RBP15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 NAGKQ9UJ70 344 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 KLF12Q9Y4X4 402 aa15.51■□□□□ 0.07
CDC42EP1-201ENST00000249014 CNIH1O95406 144 aa15.5■□□□□ 0.07
CDC42EP1-201ENST00000249014 LYZP61626 148 aa15.5■□□□□ 0.07
CDC42EP1-201ENST00000249014 UBE2G1P62253 170 aa15.5■□□□□ 0.07
CDC42EP1-201ENST00000249014 COX19Q49B96 90 aa15.5■□□□□ 0.07
CDC42EP1-201ENST00000249014 DPM3Q9P2X0 92 aa15.5■□□□□ 0.07
CDC42EP1-201ENST00000249014 CSMD1Q96PZ7 3565 aa15.5■□□□□ 0.07
CDC42EP1-201ENST00000249014 BMPR1BO00238 502 aa15.49■□□□□ 0.07
CDC42EP1-201ENST00000249014 ZNF600Q6ZNG1 722 aa15.49■□□□□ 0.07
CDC42EP1-201ENST00000249014 TIMD4Q96H15 378 aa15.49■□□□□ 0.07
CDC42EP1-201ENST00000249014 HIGD1AQ9Y241 93 aa15.49■□□□□ 0.07
CDC42EP1-201ENST00000249014 POLR3KQ9Y2Y1 108 aaPredicted RBP15.49■□□□□ 0.07
CDC42EP1-201ENST00000249014 GRAMD2BQ96HH9 432 aa15.49■□□□□ 0.07
CDC42EP1-201ENST00000249014 Q9H3A6 140 aa15.49■□□□□ 0.07
CDC42EP1-201ENST00000249014 IGKV1-17P01599 117 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 HLA-DQA1P01909 254 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 NUP35Q8NFH5 326 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 HSPB9Q9BQS6 159 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 ATG101Q9BSB4 218 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 FAM103A1Q9BTL3 118 aaKnown RBP15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 A0A1W2PRD5 423 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 A0A1W2PRF3 423 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 A0A1W2PRM7 423 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 K7EIM0 57 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 NBR2O15453 112 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 C5orf17Q8NAS9 161 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 RCHY1Q96PM5 261 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 RASL11BQ9BPW5 248 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 MLST8Q9BVC4 326 aa15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 SLC25A39Q9BZJ4 359 aaPredicted RBP15.48■□□□□ 0.07
CDC42EP1-201ENST00000249014 SRIP30626 198 aa15.47■□□□□ 0.07
CDC42EP1-201ENST00000249014 SLAQ13239 276 aa15.47■□□□□ 0.07
CDC42EP1-201ENST00000249014 LINC00322Q6ZN03 302 aaPredicted RBP15.47■□□□□ 0.07
CDC42EP1-201ENST00000249014 GPR82Q96P67 336 aa15.47■□□□□ 0.07
CDC42EP1-201ENST00000249014 SRSF8Q9BRL6 282 aaKnown RBP15.47■□□□□ 0.07
CDC42EP1-201ENST00000249014 LOC105371242A0A075B767 164 aa15.46■□□□□ 0.07
CDC42EP1-201ENST00000249014 ODF3BA8MYP8 253 aa15.46■□□□□ 0.07
CDC42EP1-201ENST00000249014 USF2Q15853 346 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms