RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 SLC25A33Q9BSK2 321 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 FCN1O00602 326 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 SPINK4O60575 86 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 PRRX1P54821 245 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 MFAP2P55001 183 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 UBE2L3P68036 154 aaKnown RBP12.64□□□□□ -0.39
LRFN1-201ENST00000248668 COA6Q5JTJ3 125 aaKnown RBP12.64□□□□□ -0.39
LRFN1-201ENST00000248668 LDLRAD2Q5SZI1 272 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 ZNF596Q8TC21 504 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 LINC00479Q96M42 142 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 PYGO2Q9BRQ0 406 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 GRIFINA4D1Z8 144 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 IGLV1-47P01700 117 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 RPL27AP46776 148 aaKnown RBP12.64□□□□□ -0.39
LRFN1-201ENST00000248668 PQLC2Q6ZP29 291 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 OR8B3Q8NGG8 313 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 OR8B2Q96RD0 313 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 TXN2Q99757 166 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 PKD1L2Q7Z442 2459 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 POLQO75417 2590 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 OR10G8Q8NGN5 311 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 ZNF355PQ9NSJ1 428 aa12.64□□□□□ -0.39
LRFN1-201ENST00000248668 IGLC7A0M8Q6 106 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 FNDC10F2Z333 226 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 H3BTX0 84 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 NDUFS7O75251 213 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 C8orf88P0DMB2 117 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 ZNF137PP52743 207 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
LRFN1-201ENST00000248668 CENPWQ5EE01 88 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 PRB4P10163 310 aaPredicted RBP12.63□□□□□ -0.39
LRFN1-201ENST00000248668 FXYD3Q14802 87 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 UNQ5815/PRO19632Q6UWF5 114 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 IGKV1D-37A0A075B6S9 117 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 HELTA6NFD8 242 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 SRP14P37108 136 aaKnown RBP12.63□□□□□ -0.39
LRFN1-201ENST00000248668 CDKN1AP38936 164 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 HINT1P49773 126 aaPredicted RBP12.63□□□□□ -0.39
LRFN1-201ENST00000248668 TAS2R45P59539 299 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 VAMP3Q15836 100 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 FAM71F2Q6NXP2 309 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 OR1B1Q8NGR6 318 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 CACNG8Q8WXS5 425 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 SGK494Q96LW2 274 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 FAM103A1Q9BTL3 118 aaKnown RBP12.63□□□□□ -0.39
LRFN1-201ENST00000248668 SLC25A2Q9BXI2 301 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 TMEM167BQ9NRX6 74 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 ZFP30Q9Y2G7 519 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 SIGLEC9Q9Y336 463 aa12.63□□□□□ -0.39
LRFN1-201ENST00000248668 FRMD6-AS1P0C7T7 363 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 MGST1P10620 155 aaKnown RBP12.62□□□□□ -0.39
LRFN1-201ENST00000248668 LGALS7P47929 136 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 CNN1P51911 297 aaKnown RBP12.62□□□□□ -0.39
LRFN1-201ENST00000248668 SLC35B1P78383 322 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 PATE2Q6UY27 113 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 C8orf31Q8N9H6 132 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 OR4A5Q8NH83 315 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 RNASE7Q9H1E1 156 aaKnown RBP12.62□□□□□ -0.39
LRFN1-201ENST00000248668 GNG4P50150 75 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 RIPPLY3P57055 190 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 FBXL19-AS1Q494R0 122 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 C10orf113Q5VZT2 155 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 EAF1Q96JC9 268 aaPredicted RBP12.62□□□□□ -0.39
LRFN1-201ENST00000248668 VAMP8Q9BV40 100 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 RAB1BQ9H0U4 201 aa12.62□□□□□ -0.39
LRFN1-201ENST00000248668 TIMM23O14925 209 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 IMMP2LQ96T52 175 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 TXNDC17Q9BRA2 123 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 MIEN1Q9BRT3 115 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 CSPG4Q6UVK1 2322 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 TCL1AP56279 114 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 MMD2Q8IY49 270 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 NUDT10Q8NFP7 164 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 FAM167A-AS1Q96KT0 104 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 VPS13CQ709C8 3753 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 PDLIM4P50479 330 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 PPP1R27Q86WC6 154 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 BTF3L4Q96K17 158 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 TNFRSF19Q9NS68 423 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 TRAPPC1Q9Y5R8 145 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 S4R3C0 116 aa12.61□□□□□ -0.39
LRFN1-201ENST00000248668 CCDC168Q8NDH2 2452 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 A0A1W2PPR1 153 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 TCRBV4S1A1TA0A5B7 111 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 GOSR1O95249 250 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 LINC00305Q7Z4B0 112 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 STPG4Q8N801 248 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 FBLN7Q53RD9 439 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 NUDT11Q96G61 164 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 PSMB11A5LHX3 300 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 CNIH1O95406 144 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 CBLN1P23435 193 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 ATP5IP56385 69 aaPredicted RBP12.6□□□□□ -0.39
LRFN1-201ENST00000248668 HES1Q14469 280 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 PAXXQ9BUH6 204 aa12.6□□□□□ -0.39
LRFN1-201ENST00000248668 LIPFP07098 398 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 CDKN1BP46527 198 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 RANP62826 216 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms