RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CXorf65A6NEN9 183 aa18.39■□□□□ 0.53
SYNGR3-201ENST00000248121 EGR2P11161 476 aaPredicted RBP18.39■□□□□ 0.53
SYNGR3-201ENST00000248121 RAB5AP20339 215 aa18.39■□□□□ 0.53
SYNGR3-201ENST00000248121 Q8WTZ3 238 aa18.39■□□□□ 0.53
SYNGR3-201ENST00000248121 TMEM242Q9NWH2 141 aa18.39■□□□□ 0.53
SYNGR3-201ENST00000248121 MLXQ9UH92 298 aa18.39■□□□□ 0.53
SYNGR3-201ENST00000248121 ARL2-SNX15V9GYD0 113 aa18.39■□□□□ 0.53
SYNGR3-201ENST00000248121 TRBV20OR9-2A0A075B6H5 130 aa18.38■□□□□ 0.53
SYNGR3-201ENST00000248121 BPIFB3P59826 476 aa18.38■□□□□ 0.53
SYNGR3-201ENST00000248121 OR5AU1Q8NGC0 362 aa18.38■□□□□ 0.53
SYNGR3-201ENST00000248121 FANCD2OSQ96PS1 177 aa18.38■□□□□ 0.53
SYNGR3-201ENST00000248121 URGCP-MRPS24S4R325 110 aa18.38■□□□□ 0.53
SYNGR3-201ENST00000248121 NPIPB5A8MRT5 1133 aa18.38■□□□□ 0.53
SYNGR3-201ENST00000248121 BRS3P32247 399 aa18.38■□□□□ 0.53
SYNGR3-201ENST00000248121 ORM2P19652 201 aa18.37■□□□□ 0.53
SYNGR3-201ENST00000248121 CXCL1P09341 107 aa18.37■□□□□ 0.53
SYNGR3-201ENST00000248121 GATA3P23771 443 aa18.37■□□□□ 0.53
SYNGR3-201ENST00000248121 LINC00305Q7Z4B0 112 aa18.37■□□□□ 0.53
SYNGR3-201ENST00000248121 TTC9CQ8N5M4 171 aa18.37■□□□□ 0.53
SYNGR3-201ENST00000248121 C11orf52Q96A22 123 aa18.37■□□□□ 0.53
SYNGR3-201ENST00000248121 HSPB9Q9BQS6 159 aa18.37■□□□□ 0.53
SYNGR3-201ENST00000248121 IGLV11-55A0A075B6I3 123 aa18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 ELOA3CA0A087WX78 387 aaPredicted RBP18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 MDFIC2A0A1B0GVS7 189 aa18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 GGTLC3B5MD39 225 aa18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 IGKV1-17P01599 117 aa18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 PYYP10082 97 aa18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 FLI1Q01543 452 aaPredicted RBP18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 LINC01551Q86U37 167 aa18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 OR1L6Q8NGR2 347 aa18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 OR1B1Q8NGR6 318 aa18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 PIFOQ8TCI5 191 aa18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 FLNAP21333 2647 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-201ENST00000248121 PGPEP1LA6NFU8 196 aa18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 CLDN34H7C241 214 aa18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 HLA-DRB1P01911 266 aa18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 PLP1P60201 277 aa18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 ZFP82Q8N141 532 aa18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 C1RLQ9NZP8 487 aa18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 TIGITQ495A1 244 aa18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 TMEM219Q86XT9 240 aa18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 CTDSP1Q9GZU7 261 aa18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 AURKAIP1Q9NWT8 199 aaPredicted RBP18.35■□□□□ 0.53
SYNGR3-201ENST00000248121 TGIF2-C20orf24A0A0A6YYL0 155 aa18.34■□□□□ 0.53
SYNGR3-201ENST00000248121 SH2D7A6NKC9 451 aaPredicted RBP18.34■□□□□ 0.53
SYNGR3-201ENST00000248121 SMAD7O15105 426 aaKnown RBP18.34■□□□□ 0.53
SYNGR3-201ENST00000248121 PSG1P11464 419 aa18.34■□□□□ 0.53
SYNGR3-201ENST00000248121 UBE2L3P68036 154 aaKnown RBP18.34■□□□□ 0.53
SYNGR3-201ENST00000248121 C16orf82Q7Z2V1 217 aa18.34■□□□□ 0.53
SYNGR3-201ENST00000248121 BCL6BQ8N143 479 aaPredicted RBP18.34■□□□□ 0.53
SYNGR3-201ENST00000248121 RBM14Q96PK6 669 aaKnown RBP18.34■□□□□ 0.53
SYNGR3-201ENST00000248121 S4R3C0 116 aa18.34■□□□□ 0.53
SYNGR3-201ENST00000248121 FXYD5Q96DB9 178 aa18.33■□□□□ 0.52
SYNGR3-201ENST00000248121 PAXXQ9BUH6 204 aa18.33■□□□□ 0.52
SYNGR3-201ENST00000248121 A0A1W2PRE2 83 aa18.32■□□□□ 0.52
SYNGR3-201ENST00000248121 HYPMO75409 117 aa18.32■□□□□ 0.52
SYNGR3-201ENST00000248121 TSPAN9O75954 239 aa18.32■□□□□ 0.52
SYNGR3-201ENST00000248121 OR5T1Q8NG75 326 aa18.32■□□□□ 0.52
SYNGR3-201ENST00000248121 C2CD4CQ8TF44 421 aa18.32■□□□□ 0.52
SYNGR3-201ENST00000248121 OR51M1Q9H341 326 aa18.32■□□□□ 0.52
SYNGR3-201ENST00000248121 RASL11BQ9BPW5 248 aa18.32■□□□□ 0.52
SYNGR3-201ENST00000248121 MEGF9Q9H1U4 602 aa18.32■□□□□ 0.52
SYNGR3-201ENST00000248121 CRYBB3P26998 211 aa18.31■□□□□ 0.52
SYNGR3-201ENST00000248121 F8W735 103 aaPredicted RBP18.3■□□□□ 0.52
SYNGR3-201ENST00000248121 SUMO1P63165 101 aaKnown RBP18.3■□□□□ 0.52
SYNGR3-201ENST00000248121 PRELID1Q9Y255 219 aa18.3■□□□□ 0.52
SYNGR3-201ENST00000248121 TLN2Q9Y4G6 2542 aa18.3■□□□□ 0.52
SYNGR3-201ENST00000248121 J3QLI3 93 aa18.3■□□□□ 0.52
SYNGR3-201ENST00000248121 C1orf196B1AJZ1 125 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 SNRPCP09234 159 aaKnown RBP18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 RPL35P42766 123 aaKnown RBP18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 LYZP61626 148 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 OCC1Q8TAD7 63 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 ELOVL1Q9BW60 279 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 LINC01548A6NM66 108 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 NDUFB8O95169 186 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 PFN1P07737 140 aaKnown RBP18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 LY6EQ16553 131 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 LEMD1Q68G75 181 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 SGMS2Q8NHU3 365 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 FOXC2Q99958 501 aa18.29■□□□□ 0.52
SYNGR3-201ENST00000248121 H3BUX3 64 aa18.28■□□□□ 0.52
SYNGR3-201ENST00000248121 ATP6V0E1O15342 81 aa18.28■□□□□ 0.52
SYNGR3-201ENST00000248121 RD3LP0DJH9 198 aa18.28■□□□□ 0.52
SYNGR3-201ENST00000248121 C5orf56Q8N8D9 126 aa18.28■□□□□ 0.52
SYNGR3-201ENST00000248121 H7BYZ3 331 aa18.27■□□□□ 0.52
SYNGR3-201ENST00000248121 FSHBP01225 129 aa18.27■□□□□ 0.52
SYNGR3-201ENST00000248121 RAB5BP61020 215 aa18.27■□□□□ 0.52
SYNGR3-201ENST00000248121 CYB5R2Q6BCY4 276 aa18.27■□□□□ 0.52
SYNGR3-201ENST00000248121 ANAPC16Q96DE5 110 aa18.27■□□□□ 0.52
SYNGR3-201ENST00000248121 MRPL27Q9P0M9 148 aaKnown RBP18.27■□□□□ 0.52
SYNGR3-201ENST00000248121 HIGD1AQ9Y241 93 aa18.27■□□□□ 0.52
SYNGR3-201ENST00000248121 OR2J3O76001 311 aa18.27■□□□□ 0.51
SYNGR3-201ENST00000248121 GP9P14770 177 aa18.27■□□□□ 0.51
SYNGR3-201ENST00000248121 RPS10P46783 165 aaKnown RBP18.27■□□□□ 0.51
SYNGR3-201ENST00000248121 DEFB112Q30KQ8 113 aa18.27■□□□□ 0.51
SYNGR3-201ENST00000248121 NECAP1Q8NC96 275 aa18.27■□□□□ 0.51
SYNGR3-201ENST00000248121 MXRA5Q9NR99 2828 aa18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 C9JCJ5 164 aa18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 K7EN84 100 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms