RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ZNF502Q8TBZ5 544 aa11.1□□□□□ -0.63
SDF2-201ENST00000247020 TRBV7-1A0A0A6YYK4 115 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 EIF3GO75821 320 aaKnown RBP eCLIP11.09□□□□□ -0.63
SDF2-201ENST00000247020 OR2C1O95371 312 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 PPIFP30405 207 aaKnown RBP11.09□□□□□ -0.63
SDF2-201ENST00000247020 DEFA5Q01523 94 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 KRTAP1-1Q07627 177 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 C15orf32Q32M92 178 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 Q56UQ5 140 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 TMEM160Q9NX00 188 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 HIGD1AQ9Y241 93 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 ITPR3Q14573 2671 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 MAP1AP78559 2803 aaPredicted RBP11.09□□□□□ -0.63
SDF2-201ENST00000247020 CSPG4Q6UVK1 2322 aa11.09□□□□□ -0.63
SDF2-201ENST00000247020 PDE6DO43924 150 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 PAGE4O60829 102 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 CD81P60033 236 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 BLCAPP62952 87 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 LINC00305Q7Z4B0 112 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 CYB561D1Q8N8Q1 229 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 OR1B1Q8NGR6 318 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 Q8WTZ3 238 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 FAM167A-AS1Q96KT0 104 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 ZNF355PQ9NSJ1 428 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 MRPL27Q9P0M9 148 aaKnown RBP11.08□□□□□ -0.64
SDF2-201ENST00000247020 RNF24Q9Y225 148 aa11.08□□□□□ -0.64
SDF2-201ENST00000247020 WI2-2373I1.2A0A1W2PRP0 233 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 TMEM89A2RUT3 159 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 C11orf94C9JXX5 98 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 F6UZH7 168 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 OR7C2O60412 319 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 ORM2P19652 201 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 HNF1AP20823 631 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 S100A7P31151 101 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 SCGB2A2Q13296 93 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 OR5AU1Q8NGC0 362 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 USMG5Q96IX5 58 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 SLC25A2Q9BXI2 301 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 NKX6-2Q9C056 277 aaPredicted RBP11.07□□□□□ -0.64
SDF2-201ENST00000247020 GSX1Q9H4S2 264 aaPredicted RBP11.07□□□□□ -0.64
SDF2-201ENST00000247020 DOK5Q9P104 306 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 NUPL2O15504 423 aaKnown RBP11.07□□□□□ -0.64
SDF2-201ENST00000247020 LYZP61626 148 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 CFHR3Q02985 330 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 ATP5G2Q06055 141 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 GUCA2BQ16661 112 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 FAM74A3Q4VXF1 159 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 FAM90A2PQ658T7 463 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 ZNF491Q8N8L2 437 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 RNF125Q96EQ8 232 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 ZNF503Q96F45 646 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 NPFFR1Q9GZQ6 430 aa11.07□□□□□ -0.64
SDF2-201ENST00000247020 A0A1W2PRE2 83 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 FAM74A7A6NL05 159 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 HOXA3O43365 443 aaPredicted RBP11.06□□□□□ -0.64
SDF2-201ENST00000247020 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 CTSGP08311 255 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 FAM209BQ5JX69 171 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 ZNF600Q6ZNG1 722 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 OR4F5Q8NH21 305 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 TMEM190Q8WZ59 177 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 OR4F4Q96R69 305 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 PAXXQ9BUH6 204 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 PRSS22Q9GZN4 317 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 OR51M1Q9H341 326 aa11.06□□□□□ -0.64
SDF2-201ENST00000247020 TRGV3P03979 118 aa11.05□□□□□ -0.64
SDF2-201ENST00000247020 SRP14P37108 136 aaKnown RBP11.05□□□□□ -0.64
SDF2-201ENST00000247020 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
SDF2-201ENST00000247020 CLRN3Q8NCR9 226 aa11.05□□□□□ -0.64
SDF2-201ENST00000247020 UHRF2Q96PU4 802 aa11.05□□□□□ -0.64
SDF2-201ENST00000247020 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
SDF2-201ENST00000247020 SLC25A39Q9BZJ4 359 aaPredicted RBP11.05□□□□□ -0.64
SDF2-201ENST00000247020 TMEM14CQ9P0S9 112 aa11.05□□□□□ -0.64
SDF2-201ENST00000247020 SVEP1Q4LDE5 3571 aa11.05□□□□□ -0.64
SDF2-201ENST00000247020 ZANQ9Y493 2812 aa11.05□□□□□ -0.64
SDF2-201ENST00000247020 CELSR1Q9NYQ6 3014 aa11.05□□□□□ -0.64
SDF2-201ENST00000247020 A0A0G2JLM5 398 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 OR2T8A6NH00 312 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 H3BRN7 92 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 TGOLN2O43493 480 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 IL4P05112 153 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 PNRC1Q12796 327 aaPredicted RBP11.04□□□□□ -0.64
SDF2-201ENST00000247020 MORN5Q5VZ52 161 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 CST9LP1Q5W188 147 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 CCDC140Q96MF4 163 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 S4R3C0 116 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 TEX15Q9BXT5 2789 aa11.04□□□□□ -0.64
SDF2-201ENST00000247020 ADMP35318 185 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 TPPP2P59282 170 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 UBE2G2P60604 165 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 RELQ04864 619 aaPredicted RBP11.03□□□□□ -0.64
SDF2-201ENST00000247020 RHEBQ15382 184 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 Q6ZS46 218 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 SIGLECL1Q8N7X8 197 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 NOL4LQ96MY1 436 aaPredicted RBP11.03□□□□□ -0.64
SDF2-201ENST00000247020 MS4A10Q96PG2 267 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 TCEAL7Q9BRU2 100 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 SHANK2-AS3Q9BTD1 123 aa11.03□□□□□ -0.64
SDF2-201ENST00000247020 LINC00527Q9UJ94 153 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms