RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 Q9UFV3 132 aa11.19□□□□□ -0.62
NCLN-201ENST00000246117 RAB37Q96AX2 223 aa11.18□□□□□ -0.62
NCLN-201ENST00000246117 TMEM191AQ9H0A3 160 aa11.18□□□□□ -0.62
NCLN-201ENST00000246117 IGLV2-14P01704 120 aa11.18□□□□□ -0.62
NCLN-201ENST00000246117 CIARTQ8N365 385 aaPredicted RBP11.18□□□□□ -0.62
NCLN-201ENST00000246117 SCRT1Q9BWW7 348 aa11.18□□□□□ -0.62
NCLN-201ENST00000246117 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
NCLN-201ENST00000246117 Q9H3A6 140 aa11.18□□□□□ -0.62
NCLN-201ENST00000246117 TMEM242Q9NWH2 141 aa11.18□□□□□ -0.62
NCLN-201ENST00000246117 HCFC1P51610 2035 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 NPIPB11E5RHQ5 1161 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 M0R3E3 92 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 F2RL2O00254 374 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 LGALS7P47929 136 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 ADIPOQQ15848 244 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 UNQ5815/PRO19632Q6UWF5 114 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 ASCL5Q7RTU5 278 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 C1orf174Q8IYL3 243 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 F11RQ9Y624 299 aaKnown RBP11.17□□□□□ -0.62
NCLN-201ENST00000246117 CENPEQ02224 2701 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 BOD1L1Q8NFC6 3051 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 C15orf65H3BRN8 121 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 COL5A1-AS1Q5SY13 56 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 IFITM10A6NMD0 228 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 CORTO00230 105 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 TIMM23O14925 209 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 IGHG3P01860 377 aa11.17□□□□□ -0.62
NCLN-201ENST00000246117 LRRK2Q5S007 2527 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 HIVEP2P31629 2446 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 F5H697 171 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 NUPR1O60356 82 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 SSBP2P81877 361 aaPredicted RBP11.16□□□□□ -0.62
NCLN-201ENST00000246117 PPP1R27Q86WC6 154 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 Q8NFD4 153 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 CD99P14209 185 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 LMO1P25800 156 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 RIGQ13278 110 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 NUDT10Q8NFP7 164 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 NUDT11Q96G61 164 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 KIAA1549Q9HCM3 1950 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 OR2T8A6NH00 312 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 C17orf58Q2M2W7 97 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 TMEM116Q8NCL8 245 aa11.16□□□□□ -0.62
NCLN-201ENST00000246117 PMS2P5A8MQ11 134 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 ZNF295-AS1Q8N0V1 137 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 CEP192Q8TEP8 1941 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 TMEM189A5PLL7 270 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 GGCTO75223 188 aaKnown RBP11.15□□□□□ -0.62
NCLN-201ENST00000246117 APOBEC3AP31941 199 aaPredicted RBP11.15□□□□□ -0.62
NCLN-201ENST00000246117 CKS2P33552 79 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 ZNF788Q6ZQV5 615 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 OR4B1Q8NGF8 309 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 LSM4Q9Y4Z0 139 aaKnown RBP11.15□□□□□ -0.62
NCLN-201ENST00000246117 FAM215AQ9Y5M1 114 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 GGTLC3B5MD39 225 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 GPR183P32249 361 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 VDAC2P45880 294 aaPredicted RBP11.15□□□□□ -0.62
NCLN-201ENST00000246117 UQCR10Q9UDW1 63 aa11.15□□□□□ -0.62
NCLN-201ENST00000246117 RNASE2P10153 161 aaKnown RBP11.14□□□□□ -0.63
NCLN-201ENST00000246117 PSG1P11464 419 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 TAS2R60P59551 318 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 HBBP68871 147 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 TMEM133Q9H2Q1 129 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 DSCAML1Q8TD84 2053 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 TRBV20OR9-2A0A075B6H5 130 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 IGKV3-20P01619 116 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 ZNF841Q6ZN19 808 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 CDC42EP3Q9UKI2 254 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 H0YJW9 148 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 TM4SF5O14894 197 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 BTF3P20290 206 aaKnown RBP11.14□□□□□ -0.63
NCLN-201ENST00000246117 COMPP49747 757 aaPredicted RBP11.14□□□□□ -0.63
NCLN-201ENST00000246117 EPDR1Q9UM22 224 aa11.14□□□□□ -0.63
NCLN-201ENST00000246117 LIPFP07098 398 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 RELQ04864 619 aaPredicted RBP11.13□□□□□ -0.63
NCLN-201ENST00000246117 Q8TCH9 128 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 GPR82Q96P67 336 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 PRDM13Q9H4Q3 707 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 RABAC1Q9UI14 185 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 LOC105371242A0A075B767 164 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 TCRBV4S1A1TA0A5B7 111 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 OR4C46A6NHA9 309 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 PROP1O75360 226 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 LY6DQ14210 128 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 TDRG1Q3Y452 100 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 COX19Q49B96 90 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.13□□□□□ -0.63
NCLN-201ENST00000246117 DIRC2Q96SL1 478 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
NCLN-201ENST00000246117 A0A1W2PPI3 338 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 FOSL1P15407 271 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 MORN5Q5VZ52 161 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 Q6ZSR3 168 aa11.13□□□□□ -0.63
NCLN-201ENST00000246117 MRPL32Q9BYC8 188 aaKnown RBP11.13□□□□□ -0.63
NCLN-201ENST00000246117 MBD3L4A6NDZ8 208 aaPredicted RBP11.13□□□□□ -0.63
NCLN-201ENST00000246117 MBD3L3A6NE82 208 aaPredicted RBP11.13□□□□□ -0.63
NCLN-201ENST00000246117 MBD3L5A6NJ08 208 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms