RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 IZUMO1RA6ND01 250 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 HLA-DQA1P01909 254 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 SRIP30626 198 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 LGALS7P47929 136 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 MFAP2P55001 183 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 GNG5P63218 68 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 TNXAQ16473 311 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 OR10J3Q5JRS4 329 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 OR1B1Q8NGR6 318 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 RCHY1Q96PM5 261 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 FBXL7Q9UJT9 491 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 RNF114Q9Y508 228 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 BMPR1BO00238 502 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 GPX1P07203 203 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 PMCHP20382 165 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 COL5A1-AS1Q5SY13 56 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 OR4B1Q8NGF8 309 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 RAXQ9Y2V3 346 aa11.53□□□□□ -0.56
HIF3A-202ENST00000244303 TBL2Q9Y4P3 447 aaKnown RBP11.53□□□□□ -0.56
HIF3A-202ENST00000244303 IGHV3-21A0A0B4J1V1 117 aa11.52□□□□□ -0.56
HIF3A-202ENST00000244303 CRYGCP07315 174 aa11.52□□□□□ -0.56
HIF3A-202ENST00000244303 MYCNOSP40205 109 aa11.52□□□□□ -0.56
HIF3A-202ENST00000244303 AMTP48728 403 aa11.52□□□□□ -0.56
HIF3A-202ENST00000244303 TEX45Q8NA69 505 aa11.52□□□□□ -0.56
HIF3A-202ENST00000244303 BLNKQ8WV28 456 aa11.52□□□□□ -0.56
HIF3A-202ENST00000244303 ZZEF1O43149 2961 aa11.52□□□□□ -0.56
HIF3A-202ENST00000244303 CEP295Q9C0D2 2601 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 ZNF253O75346 499 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 LINC00614P0C842 121 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 SFTPCP11686 197 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 RPL27AP46776 148 aaKnown RBP11.52□□□□□ -0.57
HIF3A-202ENST00000244303 TFPI2P48307 235 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 COMPP49747 757 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-202ENST00000244303 NHLH1Q02575 133 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 SPATA45Q537H7 98 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 ETFRF1Q6IPR1 90 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 PRR27Q6MZM9 219 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 FAM231DQ6ZW35 169 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 NUDT10Q8NFP7 164 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 MBD6Q96DN6 1003 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 PERPQ96FX8 193 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 NUDT11Q96G61 164 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 KCNS1Q96KK3 526 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 ZNF331Q9NQX6 463 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-202ENST00000244303 CBY1Q9Y3M2 126 aa11.52□□□□□ -0.57
HIF3A-202ENST00000244303 IGHV2-26A0A0B4J1V2 119 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 CD3EP07766 207 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 RELQ04864 619 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-202ENST00000244303 SLAQ13239 276 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 PVRIGQ6DKI7 326 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 ZNF841Q6ZN19 808 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 SGK494Q96LW2 274 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 NRN1Q9NPD7 142 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-202ENST00000244303 A0A1W2PS18 150 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 LYNX1G3V0Z9 82 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 APCSP02743 223 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 SLC25A5P05141 298 aaKnown RBP11.51□□□□□ -0.57
HIF3A-202ENST00000244303 LYNX1P0DP58 116 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 APOBEC3AP31941 199 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-202ENST00000244303 UCNP55089 124 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 LINC01560Q8TB33 94 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 TRGV9Q99603 122 aa11.51□□□□□ -0.57
HIF3A-202ENST00000244303 IGLV1-47P01700 117 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 CRYGBP07316 175 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 UBE2G1P62253 170 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 NUP35Q8NFH5 326 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 C22orf15Q8WYQ4 148 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 GRAMD2BQ96HH9 432 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 C7orf69Q9H7B7 122 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 EPDR1Q9UM22 224 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 RPH3ALQ9UNE2 315 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 SIGLEC9Q9Y336 463 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 TACC2O95359 2948 aa11.5□□□□□ -0.57
HIF3A-202ENST00000244303 PGPA6NDG6 321 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 FAM90A27PA6NNH2 459 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 CORTO00230 105 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 CA7P43166 264 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 MMDQ15546 238 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 STXBP6Q8NFX7 210 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 TNFRSF14Q92956 283 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 TXN2Q99757 166 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 RALYQ9UKM9 306 aaKnown RBP11.49□□□□□ -0.57
HIF3A-202ENST00000244303 IGHV1-3A0A0C4DH29 117 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 WIPF2Q8TF74 440 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-202ENST00000244303 GSX1Q9H4S2 264 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-202ENST00000244303 INSIG2Q9Y5U4 225 aa11.49□□□□□ -0.57
HIF3A-202ENST00000244303 B9A039 149 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 SIAH2O43255 324 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 NBEAP1P0C6P0 100 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 PRRX1P54821 245 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 GDF5OSQ5U4N7 250 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 LEMD1Q68G75 181 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 Q6ZN92 141 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 Q8N976 141 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 UQCR10Q9UDW1 63 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 TLN1Q9Y490 2541 aaKnown RBP11.48□□□□□ -0.57
HIF3A-202ENST00000244303 BUB1B-PAK6H3BSN5 160 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms