RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 IER3P46695 156 aa10.18□□□□□ -0.78
HIF3A-201ENST00000244302 ERHP84090 104 aaKnown RBP10.18□□□□□ -0.78
HIF3A-201ENST00000244302 VWC2Q2TAL6 325 aa10.18□□□□□ -0.78
HIF3A-201ENST00000244302 C9orf152Q5JTZ5 239 aa10.18□□□□□ -0.78
HIF3A-201ENST00000244302 RPP25LQ8N5L8 163 aaKnown RBP10.18□□□□□ -0.78
HIF3A-201ENST00000244302 OR5R1Q8NH85 324 aa10.18□□□□□ -0.78
HIF3A-201ENST00000244302 ANAPC16Q96DE5 110 aa10.18□□□□□ -0.78
HIF3A-201ENST00000244302 OR5B12Q96R08 314 aa10.18□□□□□ -0.78
HIF3A-201ENST00000244302 GPR61Q9BZJ8 451 aa10.18□□□□□ -0.78
HIF3A-201ENST00000244302 ACTR3CQ9C0K3 210 aaPredicted RBP10.18□□□□□ -0.78
HIF3A-201ENST00000244302 TEP1Q99973 2627 aaKnown RBP10.17□□□□□ -0.78
HIF3A-201ENST00000244302 ATP6V0E1O15342 81 aa10.17□□□□□ -0.78
HIF3A-201ENST00000244302 HOXA3O43365 443 aaPredicted RBP10.17□□□□□ -0.78
HIF3A-201ENST00000244302 PFN1P07737 140 aaKnown RBP10.17□□□□□ -0.78
HIF3A-201ENST00000244302 DEFA4P12838 97 aa10.17□□□□□ -0.78
HIF3A-201ENST00000244302 DEFA6Q01524 100 aa10.17□□□□□ -0.78
HIF3A-201ENST00000244302 TMEM95Q3KNT9 176 aa10.17□□□□□ -0.78
HIF3A-201ENST00000244302 COA6Q5JTJ3 125 aaKnown RBP10.17□□□□□ -0.78
HIF3A-201ENST00000244302 TMEM183AQ8IXX5 376 aa10.17□□□□□ -0.78
HIF3A-201ENST00000244302 ARPC1AQ92747 370 aa10.17□□□□□ -0.78
HIF3A-201ENST00000244302 WNT10AQ9GZT5 417 aa10.17□□□□□ -0.78
HIF3A-201ENST00000244302 GSX1Q9H4S2 264 aaPredicted RBP10.17□□□□□ -0.78
HIF3A-201ENST00000244302 IGKV1OR2-108A0A075B7D4 117 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 C17orf112F2Z3M2 114 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 CD5LO43866 347 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 FGF7P21781 194 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 ADIRFQ15847 76 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 C2orf83Q53S99 150 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 RNASEH2CQ8TDP1 164 aaKnown RBP10.16□□□□□ -0.78
HIF3A-201ENST00000244302 MISP3Q96FF7 219 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 NOL4LQ96MY1 436 aaPredicted RBP10.16□□□□□ -0.78
HIF3A-201ENST00000244302 PRDM13Q9H4Q3 707 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 FN1P02751 2386 aaKnown RBP10.16□□□□□ -0.78
HIF3A-201ENST00000244302 A0A1W2PN81 502 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 H7BYZ3 331 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 LY6G6DO95868 133 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 CHRNA7P36544 502 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 FAM3BP58499 235 aaPredicted RBP10.16□□□□□ -0.78
HIF3A-201ENST00000244302 PKIAP61925 76 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 ECSCRQ19T08 205 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 ACSM6Q6P461 480 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 TREML4Q6UXN2 200 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 C16orf82Q7Z2V1 217 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 SIGLECL1Q8N7X8 197 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 ZNF709Q8N972 641 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 OR10G9Q8NGN4 311 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 OR10G7Q8NGN6 311 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 ACY3Q96HD9 319 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 BTF3L4Q96K17 158 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 C1RLQ9NZP8 487 aa10.16□□□□□ -0.78
HIF3A-201ENST00000244302 F8P00451 2351 aa10.15□□□□□ -0.78
HIF3A-201ENST00000244302 NSD1Q96L73 2696 aaPredicted RBP10.15□□□□□ -0.78
HIF3A-201ENST00000244302 GATA2P23769 480 aaPredicted RBP10.15□□□□□ -0.78
HIF3A-201ENST00000244302 SRP14P37108 136 aaKnown RBP10.15□□□□□ -0.78
HIF3A-201ENST00000244302 RPL23P62829 140 aaKnown RBP10.15□□□□□ -0.78
HIF3A-201ENST00000244302 GAMTQ14353 236 aa10.15□□□□□ -0.78
HIF3A-201ENST00000244302 GFI1BQ5VTD9 330 aa10.15□□□□□ -0.78
HIF3A-201ENST00000244302 Q6YL49 198 aa10.15□□□□□ -0.78
HIF3A-201ENST00000244302 PACRGQ96M98 296 aaPredicted RBP10.15□□□□□ -0.78
HIF3A-201ENST00000244302 MOB4Q9Y3A3 225 aa10.15□□□□□ -0.78
HIF3A-201ENST00000244302 TSTD3H0UI37 97 aa10.15□□□□□ -0.79
HIF3A-201ENST00000244302 HLA-DRB1P01911 266 aa10.15□□□□□ -0.79
HIF3A-201ENST00000244302 FABP4P15090 132 aa10.15□□□□□ -0.79
HIF3A-201ENST00000244302 FFAR4Q5NUL3 377 aa10.15□□□□□ -0.79
HIF3A-201ENST00000244302 OR51G1Q8NGK1 321 aa10.15□□□□□ -0.79
HIF3A-201ENST00000244302 OR4X1Q8NH49 305 aa10.15□□□□□ -0.79
HIF3A-201ENST00000244302 HIST1H2BLQ99880 126 aa10.15□□□□□ -0.79
HIF3A-201ENST00000244302 PARLQ9H300 379 aa10.15□□□□□ -0.79
HIF3A-201ENST00000244302 PPP5D1E7EU14 171 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 INS-IGF2F8WCM5 200 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 HMGB3O15347 200 aaKnown RBP10.14□□□□□ -0.79
HIF3A-201ENST00000244302 IGHV3-23P01764 117 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 MDKP21741 143 aaPredicted RBP10.14□□□□□ -0.79
HIF3A-201ENST00000244302 GALR1P47211 349 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 RPP30P78346 268 aaKnown RBP10.14□□□□□ -0.79
HIF3A-201ENST00000244302 ACOT6Q3I5F7 207 aaPredicted RBP10.14□□□□□ -0.79
HIF3A-201ENST00000244302 GCSAMLQ5JQS6 135 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 C9orf139Q6ZV77 190 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 FANCD2OSQ96PS1 177 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 NPCDR1Q9BY65 106 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 SLC25A22Q9H936 323 aa10.14□□□□□ -0.79
HIF3A-201ENST00000244302 F11RQ9Y624 299 aaKnown RBP10.14□□□□□ -0.79
HIF3A-201ENST00000244302 TYMSP04818 313 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 CD99P14209 185 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 OPRK1P41145 380 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 OR1P1Q8NH06 330 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 MGST2Q99735 147 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 GGCTO75223 188 aaKnown RBP10.13□□□□□ -0.79
HIF3A-201ENST00000244302 CD69Q07108 199 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 JOSD1Q15040 202 aaPredicted RBP10.13□□□□□ -0.79
HIF3A-201ENST00000244302 PDZD11Q5EBL8 140 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 UNQ5815/PRO19632Q6UWF5 114 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 C10orf99Q6UWK7 81 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 LCNL1Q6ZST4 164 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 OR4F5Q8NH21 305 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 NPIPB3Q92617 1050 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 RPUSD4Q96CM3 377 aaKnown RBP10.13□□□□□ -0.79
HIF3A-201ENST00000244302 MS4A10Q96PG2 267 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 OR4F4Q96R69 305 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms