RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 CACNG8Q8WXS5 425 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 TMEM186Q96B77 213 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 OSTCQ9NRP0 149 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.49□□□□□ -0.25
SSPN-201ENST00000242729 IGLC7A0M8Q6 106 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 FNDC10F2Z333 226 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 LINC00322Q6ZN03 302 aaPredicted RBP13.49□□□□□ -0.25
SSPN-201ENST00000242729 GNB1LQ9BYB4 327 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 PLGLAQ15195 96 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 TMEM155Q4W5P6 130 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 LCN12Q6JVE5 192 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 VSTM2AQ8TAG5 236 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 TMEM133Q9H2Q1 129 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 ZNF835Q9Y2P0 537 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 INSIG2Q9Y5U4 225 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 A0A1W2PS18 150 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 APCSP02743 223 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 SUB1P53999 127 aaKnown RBP eCLIP13.49□□□□□ -0.25
SSPN-201ENST00000242729 DLX6P56179 175 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 LYZP61626 148 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 UBE2G1P62253 170 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 MAJINQ3KP22 176 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 NRN1Q9NPD7 142 aa13.49□□□□□ -0.25
SSPN-201ENST00000242729 ZNF331Q9NQX6 463 aaPredicted RBP13.49□□□□□ -0.25
SSPN-201ENST00000242729 VWC2LB2RUY7 222 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 GPX1P07203 203 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 PMCHL1Q16048 86 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 CYB5R2Q6BCY4 276 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 NUP35Q8NFH5 326 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 OR2D3Q8NGH3 330 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 HILPDAQ9Y5L2 63 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 LY96Q9Y6Y9 160 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 IGHV2-26A0A0B4J1V2 119 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 HIGD1CA8MV81 97 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 AMY1AP04745 511 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 RPL27AP46776 148 aaKnown RBP13.48□□□□□ -0.25
SSPN-201ENST00000242729 BPIFB3P59826 476 aa13.48□□□□□ -0.25
SSPN-201ENST00000242729 KLF17Q5JT82 389 aaPredicted RBP13.48□□□□□ -0.25
SSPN-201ENST00000242729 FSTL3O95633 263 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 RBP4P02753 201 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 BRS3P32247 399 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 ZNF137PP52743 207 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 FOXA3P55318 350 aaPredicted RBP13.47□□□□□ -0.25
SSPN-201ENST00000242729 C2orf88Q9BSF0 95 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 VAMP8Q9BV40 100 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 MRPL32Q9BYC8 188 aaKnown RBP13.47□□□□□ -0.25
SSPN-201ENST00000242729 ONECUT1Q9UBC0 465 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 SMIM27A0A1W2PRY6 76 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 DIRC3C9JPN6 131 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 TCAPO15273 167 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 COMPP49747 757 aaPredicted RBP13.47□□□□□ -0.25
SSPN-201ENST00000242729 EXOC3-AS1Q8N2X6 119 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 NEU1Q99519 415 aa13.47□□□□□ -0.25
SSPN-201ENST00000242729 TNFRSF13BO14836 293 aaPredicted RBP13.46□□□□□ -0.25
SSPN-201ENST00000242729 PAFAH1B2P68402 229 aa13.46□□□□□ -0.25
SSPN-201ENST00000242729 SPACA3Q8IXA5 215 aa13.46□□□□□ -0.25
SSPN-201ENST00000242729 OR1L4Q8NGR5 311 aa13.46□□□□□ -0.25
SSPN-201ENST00000242729 TIMM8BQ9Y5J9 83 aaPredicted RBP13.46□□□□□ -0.25
SSPN-201ENST00000242729 SH2D7A6NKC9 451 aaPredicted RBP13.46□□□□□ -0.26
SSPN-201ENST00000242729 NBEAP1P0C6P0 100 aa13.46□□□□□ -0.26
SSPN-201ENST00000242729 PNKDQ8N490 385 aa13.46□□□□□ -0.26
SSPN-201ENST00000242729 C19orf24Q9BVV8 132 aa13.46□□□□□ -0.26
SSPN-201ENST00000242729 CDSNQ15517 529 aa13.45□□□□□ -0.26
SSPN-201ENST00000242729 LDLRAD2Q5SZI1 272 aa13.45□□□□□ -0.26
SSPN-201ENST00000242729 IGHV1-3A0A0C4DH29 117 aa13.45□□□□□ -0.26
SSPN-201ENST00000242729 KIR2DL5BA0A0G2JN68 375 aa13.45□□□□□ -0.26
SSPN-201ENST00000242729 KIR2DL5BA0A0G2JPC4 375 aa13.45□□□□□ -0.26
SSPN-201ENST00000242729 TBR1Q16650 682 aa13.45□□□□□ -0.26
SSPN-201ENST00000242729 FBLN7Q53RD9 439 aa13.45□□□□□ -0.26
SSPN-201ENST00000242729 KIR2DL5AQ8N109 375 aa13.45□□□□□ -0.26
SSPN-201ENST00000242729 IZUMO1RA6ND01 250 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 CNIH1O95406 144 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 Q0VG73 95 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 RNASEKQ6P5S7 137 aaKnown RBP13.44□□□□□ -0.26
SSPN-201ENST00000242729 C17orf77Q96MU5 243 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 ZNF586Q9NXT0 402 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 EPDR1Q9UM22 224 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 SIGLEC9Q9Y336 463 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 VSTM5A8MXK1 200 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 M0R143 59 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 TFPI2P48307 235 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 ARF6P62330 175 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 KLRD1Q13241 179 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 WDR73Q6P4I2 378 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 BEND2Q8NDZ0 799 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 TSKUQ8WUA8 353 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 PGLYRP4Q96LB8 373 aa13.44□□□□□ -0.26
SSPN-201ENST00000242729 TRAV9-1A0A075B6T8 112 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 PSG1P11464 419 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 TMEM30BQ3MIR4 351 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 RPEQ96AT9 228 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 KCNS1Q96KK3 526 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 CHODLQ9H9P2 273 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 PPIAL4CA0A0B4J2A2 164 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 HYPMO75409 117 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 CD3EP07766 207 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 PPIAL4GP0DN37 164 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 CASP6P55212 293 aa13.43□□□□□ -0.26
SSPN-201ENST00000242729 NUTF2P61970 127 aaKnown RBP13.43□□□□□ -0.26
SSPN-201ENST00000242729 PPP1R27Q86WC6 154 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms