RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 YPEL2Q96QA6 119 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 LRRK1Q38SD2 2015 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 DDB2Q92466 427 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 EEF1AKMT3Q96AZ1 226 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 MS4A6AQ9H2W1 248 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 CCDC168Q8NDH2 2452 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 COL4A3Q01955 1670 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 A0A0G2JLM5 398 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 MLNRO43193 412 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 IGLL1P15814 213 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 COL8A1P27658 744 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 TMEM144Q7Z5S9 345 aa9.06□□□□□ -0.96
COPA-201ENST00000241704 TRAV40A0A0B4J280 105 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 SNAI2O43623 268 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 C5orf17Q8NAS9 161 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 CRIM1Q9NZV1 1036 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 CX3CL1P78423 397 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 IGFL3Q6UXB1 125 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 FAM216AQ8WUB2 273 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 RNASE7Q9H1E1 156 aaKnown RBP9.05□□□□□ -0.96
COPA-201ENST00000241704 ZNF257Q9Y2Q1 563 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 B4DSR2 109 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 SMIM13P0DJ93 91 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 COLCA1Q6ZS62 124 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 A0A1W2PRX2 142 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 F2Z2F3 143 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 PLAUP00749 431 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 PRB3Q04118 309 aaPredicted RBP9.05□□□□□ -0.96
COPA-201ENST00000241704 TMEM78Q5T7P6 136 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 TMEM136Q6ZRR5 245 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 OR10J6PQ8NGY7 276 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 PRSS22Q9GZN4 317 aa9.05□□□□□ -0.96
COPA-201ENST00000241704 A0A0G2JRQ6 117 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 C9JCJ5 164 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 NPPCP23582 126 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 FCGR2BP31994 310 aaPredicted RBP9.04□□□□□ -0.96
COPA-201ENST00000241704 RRN3P1Q2M238 152 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 TMEM14EPQ6UXP3 125 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 FAM169BQ8N8A8 192 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 OR8A1Q8NGG7 326 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 PAXXQ9BUH6 204 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 DOCK11Q5JSL3 2073 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 A0A087X0K7 114 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 FOXI3A8MTJ6 420 aaPredicted RBP9.04□□□□□ -0.96
COPA-201ENST00000241704 IGKV3-15P01624 115 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 RNF138Q8WVD3 245 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 ATP6V0BQ99437 205 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 LY96Q9Y6Y9 160 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 IGF2RP11717 2491 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 BVES-AS1Q5T3Y7 98 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 ASCL4Q6XD76 172 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 hDV102S1A0JD36 115 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 NMUP48645 174 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 ZNF474Q6S9Z5 364 aaPredicted RBP9.04□□□□□ -0.96
COPA-201ENST00000241704 DEFB125Q8N687 156 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 NHLRC2Q8NBF2 726 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 RAX2Q96IS3 184 aa9.04□□□□□ -0.96
COPA-201ENST00000241704 ZNF581Q9P0T4 197 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 ANKHD1Q8IWZ3 2542 aaKnown RBP9.03□□□□□ -0.96
COPA-201ENST00000241704 FAM231BA6NCW3 169 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 MOSP00540 346 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 GCSHP23434 173 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 DUX5Q96PT3 197 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 SELENOKQ9Y6D0 94 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 KIAA2026Q5HYC2 2103 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 IGHV3OR16-13A0A075B7E8 117 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 SAA2-SAA4A0A096LPE2 208 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 IGHV3-74A0A0B4J1X5 117 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 P01737 135 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 IGHV3-48P01763 117 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 TFF1P04155 84 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 GCSAMLQ5JQS6 135 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
COPA-201ENST00000241704 A8MWL6 223 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 CA1P00915 261 aaPredicted RBP9.03□□□□□ -0.96
COPA-201ENST00000241704 SCGB1A1P11684 91 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 FOXA3P55318 350 aaPredicted RBP9.03□□□□□ -0.96
COPA-201ENST00000241704 HAPLN4Q86UW8 402 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 PPP1R27Q86WC6 154 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 TMEM133Q9H2Q1 129 aa9.03□□□□□ -0.96
COPA-201ENST00000241704 PSPNO60542 156 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 SAP30O75446 220 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 C8orf46Q8TAG6 207 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 DKK1O94907 266 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 CGAP01215 116 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 C11orf44Q8N8P7 122 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 ZNF114Q8NC26 417 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 CYYR1Q96J86 154 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 TMSB15BA0A087X1C1 80 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.02□□□□□ -0.97
COPA-201ENST00000241704 CGB1A6NKQ9 187 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 STAG3L2P0CL84 134 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 STAG3L3P0CL85 134 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 RPL7P18124 248 aaKnown RBP9.02□□□□□ -0.97
COPA-201ENST00000241704 TCTAP57738 103 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 Q6ZRM9 215 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 C11orf1Q9H5F2 150 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 WDR83OSQ9Y284 106 aa9.02□□□□□ -0.97
COPA-201ENST00000241704 HBBP68871 147 aa9.01□□□□□ -0.97
COPA-201ENST00000241704 SLC25A33Q9BSK2 321 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms