RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CIARTQ8N365 385 aaPredicted RBP11.04□□□□□ -0.64
NEK9-201ENST00000238616 RIPPLY2Q5TAB7 128 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
NEK9-201ENST00000238616 KLRD1Q13241 179 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 CSRP2Q16527 193 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 ZXDCQ2QGD7 858 aaPredicted RBP11.04□□□□□ -0.64
NEK9-201ENST00000238616 VWC2LB2RUY7 222 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 FCN3O75636 299 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 CA7P43166 264 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 HLA-DQB1P01920 261 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 GAGE2EQ4V326 116 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 C1orf53Q5VUE5 145 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 DLX4Q92988 240 aaPredicted RBP11.04□□□□□ -0.64
NEK9-201ENST00000238616 GAGE2DQ9UEU5 116 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 ESDP10768 282 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 FAM166AQ6J272 317 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 RNF125Q96EQ8 232 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 CFHR5Q9BXR6 569 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 MPTX1A8MV57 137 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 BRD3OSQ6XYD6 125 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 LSM4Q9Y4Z0 139 aaKnown RBP11.03□□□□□ -0.64
NEK9-201ENST00000238616 NUP210Q8TEM1 1887 aaPredicted RBP11.03□□□□□ -0.64
NEK9-201ENST00000238616 FOXL1Q12952 345 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 LAGE3Q14657 143 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 MAPK1IP1LQ8NDC0 245 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 TMEM126AQ9H061 195 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 CUL9Q8IWT3 2517 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 RAMP1O60894 148 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 ATXN8Q156A1 80 aa11.03□□□□□ -0.64
NEK9-201ENST00000238616 ZNF660Q6AZW8 331 aaPredicted RBP11.03□□□□□ -0.64
NEK9-201ENST00000238616 RCC1LQ96I51 464 aaKnown RBP11.03□□□□□ -0.64
NEK9-201ENST00000238616 PRSS23O95084 383 aa11.02□□□□□ -0.64
NEK9-201ENST00000238616 H2BFSP57053 126 aa11.02□□□□□ -0.64
NEK9-201ENST00000238616 PSG7Q13046 419 aa11.02□□□□□ -0.64
NEK9-201ENST00000238616 LINC00312Q9Y6C7 94 aa11.02□□□□□ -0.64
NEK9-201ENST00000238616 CLPSL1A2RUU4 121 aa11.02□□□□□ -0.64
NEK9-201ENST00000238616 C1orf159Q96HA4 380 aa11.02□□□□□ -0.64
NEK9-201ENST00000238616 A0A0G2JK05 382 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 F5H768 121 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 IGKCP01834 107 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 RBMY1FQ15415 496 aaKnown RBP11.02□□□□□ -0.65
NEK9-201ENST00000238616 C9orf106Q8NAJ2 232 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 OR10W1Q8NGF6 305 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 WDR90Q96KV7 1748 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A10PA6NDY2 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A18PA6NE21 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A16PA6NEW6 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A20PA6NIJ5 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A8PA6NJQ4 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 ZNF98A6NK75 572 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A7PA6NKC0 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A22PA8MWA6 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A12PA8MX19 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A5PA8MXJ8 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A23PA8MXZ1 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A15PP0C7V4 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A13PP0C7W8 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A14PP0C7W9 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 FAM90A24PP0C7X0 464 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 CACNG8Q8WXS5 425 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 SLC50A1Q9BRV3 221 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 LEPROTO15243 131 aa11.02□□□□□ -0.65
NEK9-201ENST00000238616 SRRM4A7MD48 611 aaKnown RBP11.02□□□□□ -0.65
NEK9-201ENST00000238616 TRAV13-1A0A0B4J241 112 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 IZUMO1RA6ND01 250 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 A8MXK9 166 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 LIMS1P48059 325 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 PRR31Q5SQ13 230 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 C12orf77C9JDV5 145 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 SPACA3Q8IXA5 215 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 ERG28Q9UKR5 140 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 ZNF329Q86UD4 541 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 ZNF561-AS1K7EIQ3 104 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 CD160O95971 181 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 PYYP10082 97 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 TIMM23O14925 209 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 OCIAD2Q56VL3 154 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 TMEM133Q9H2Q1 129 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 OTORQ9NRC9 128 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 IGLV1-36A0A0B4J1U3 117 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 SS18Q15532 418 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 FAM110DQ8TAY7 271 aaPredicted RBP11.01□□□□□ -0.65
NEK9-201ENST00000238616 SNHG12Q9BXW3 62 aa11.01□□□□□ -0.65
NEK9-201ENST00000238616 PRB1P04280 392 aa11□□□□□ -0.65
NEK9-201ENST00000238616 PRTN3P24158 256 aa11□□□□□ -0.65
NEK9-201ENST00000238616 ADMP35318 185 aa11□□□□□ -0.65
NEK9-201ENST00000238616 EXOC3-AS1Q8N2X6 119 aa11□□□□□ -0.65
NEK9-201ENST00000238616 GGTLC1Q9BX51 225 aa11□□□□□ -0.65
NEK9-201ENST00000238616 TRAV25A0A0B4J276 109 aa11□□□□□ -0.65
NEK9-201ENST00000238616 WFDC6Q9BQY6 131 aa11□□□□□ -0.65
NEK9-201ENST00000238616 DEPPQ9NTK1 212 aa11□□□□□ -0.65
NEK9-201ENST00000238616 KLF12Q9Y4X4 402 aa11□□□□□ -0.65
NEK9-201ENST00000238616 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11□□□□□ -0.65
NEK9-201ENST00000238616 TNFRSF6BO95407 300 aa11□□□□□ -0.65
NEK9-201ENST00000238616 PTPRBP23467 1997 aa11□□□□□ -0.65
NEK9-201ENST00000238616 LOC102723996A0A087X1L8 192 aa11□□□□□ -0.65
NEK9-201ENST00000238616 ZNF876PQ49A33 203 aa11□□□□□ -0.65
NEK9-201ENST00000238616 SPSB3Q6PJ21 355 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms