RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 CACNG8Q8WXS5 425 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 FXYD5Q96DB9 178 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 ONECUT1Q9UBC0 465 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 FBXL7Q9UJT9 491 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 ZNF835Q9Y2P0 537 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 HIVEP3Q5T1R4 2406 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 A0A1W2PRE2 83 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 VSTM5A8MXK1 200 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 M0QZ24 198 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 PEX7O00628 323 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 SIAH2O43255 324 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 RBP4P02753 201 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 RPL27AP46776 148 aaKnown RBP7.32□□□□□ -1.24
SYDE2-201ENST00000234668 AMTP48728 403 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 LYZP61626 148 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 NDUFAF3Q9BU61 184 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 SNHG12Q9BXW3 62 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 CDC42EP3Q9UKI2 254 aa7.32□□□□□ -1.24
SYDE2-201ENST00000234668 A6NNC1 897 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 VWC2LB2RUY7 222 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 BMPR1BO00238 502 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 G0S2P27469 103 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 SUB1P53999 127 aaKnown RBP eCLIP7.31□□□□□ -1.24
SYDE2-201ENST00000234668 TPPP2P59282 170 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 KLRD1Q13241 179 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 VSTM2AQ8TAG5 236 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 WNT10AQ9GZT5 417 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 PPIAL4CA0A0B4J2A2 164 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 FNDC10F2Z333 226 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 CD3EP07766 207 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 PPIAL4GP0DN37 164 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 APOBEC3AP31941 199 aaPredicted RBP7.31□□□□□ -1.24
SYDE2-201ENST00000234668 SELENOTP62341 195 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 LCN12Q6JVE5 192 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 BCL6BQ8N143 479 aaPredicted RBP7.31□□□□□ -1.24
SYDE2-201ENST00000234668 EXOC3-AS1Q8N2X6 119 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 MUC15Q8N387 334 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 SIGLECL1Q8N7X8 197 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 TMEM68Q96MH6 324 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 C17orf77Q96MU5 243 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 OSTCQ9NRP0 149 aa7.31□□□□□ -1.24
SYDE2-201ENST00000234668 TBL2Q9Y4P3 447 aaKnown RBP7.31□□□□□ -1.24
SYDE2-201ENST00000234668 IGHV1-3A0A0C4DH29 117 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 CNIH1O95406 144 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 FSTL3O95633 263 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 NBEAP1P0C6P0 100 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 ZNF137PP52743 207 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 NUP35Q8NFH5 326 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 OR2D3Q8NGH3 330 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 ZNF331Q9NQX6 463 aaPredicted RBP7.3□□□□□ -1.24
SYDE2-201ENST00000234668 JKAMPQ9P055 326 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 SIGLEC9Q9Y336 463 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 IGHV3OR16-8A0A075B7F1 116 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 A0A1W2PS18 150 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 FOXA3P55318 350 aaPredicted RBP7.3□□□□□ -1.24
SYDE2-201ENST00000234668 PMCHL1Q16048 86 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 TPTE2P1Q5T6R2 138 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 RPEQ96AT9 228 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 NOL4LQ96MY1 436 aaPredicted RBP7.3□□□□□ -1.24
SYDE2-201ENST00000234668 TIMM8BQ9Y5J9 83 aaPredicted RBP7.3□□□□□ -1.24
SYDE2-201ENST00000234668 HIGD1CA8MV81 97 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 BUB1B-PAK6H3BSN5 160 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 IGHV3-23P01764 117 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 APCSP02743 223 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 GPX1P07203 203 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 PSG1P11464 419 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 UBE2G1P62253 170 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 MAJINQ3KP22 176 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 PPP1R27Q86WC6 154 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 NEU1Q99519 415 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 GNB1LQ9BYB4 327 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 NRN1Q9NPD7 142 aa7.3□□□□□ -1.24
SYDE2-201ENST00000234668 IGHV3-35A0A0C4DH35 117 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 SH2D7A6NKC9 451 aaPredicted RBP7.29□□□□□ -1.24
SYDE2-201ENST00000234668 BPIFB3P59826 476 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 C1orf194Q5T5A4 169 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 OR1L4Q8NGR5 311 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 EPDR1Q9UM22 224 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 LY96Q9Y6Y9 160 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 SMIM27A0A1W2PRY6 76 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 CCL21O00585 134 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 TIMM23O14925 209 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 HYPMO75409 117 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 PAX1P15863 534 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 MC5RP33032 325 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 HES1Q14469 280 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 MMDQ15546 238 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 CIARTQ8N365 385 aaPredicted RBP7.29□□□□□ -1.24
SYDE2-201ENST00000234668 PGLYRP4Q96LB8 373 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 MRPL32Q9BYC8 188 aaKnown RBP7.29□□□□□ -1.24
SYDE2-201ENST00000234668 NGBQ9NPG2 151 aa7.29□□□□□ -1.24
SYDE2-201ENST00000234668 IGLV1-47P01700 117 aa7.28□□□□□ -1.24
SYDE2-201ENST00000234668 AMY1AP04745 511 aa7.28□□□□□ -1.24
SYDE2-201ENST00000234668 BRS3P32247 399 aa7.28□□□□□ -1.24
SYDE2-201ENST00000234668 LGALS7P47929 136 aa7.28□□□□□ -1.24
SYDE2-201ENST00000234668 ZNF672Q499Z4 452 aaPredicted RBP7.28□□□□□ -1.24
SYDE2-201ENST00000234668 DNLZQ5SXM8 178 aa7.28□□□□□ -1.24
SYDE2-201ENST00000234668 LINC00311Q8N616 119 aa7.28□□□□□ -1.24
SYDE2-201ENST00000234668 SRSF12Q8WXF0 261 aaKnown RBP7.28□□□□□ -1.24
SYDE2-201ENST00000234668 C19orf24Q9BVV8 132 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms