RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 K7EP34 96 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 C2orf82Q6UX34 121 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 TNFRSF14Q92956 283 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 DEPPQ9NTK1 212 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 IGKV1D-43A0A0B4J1Z2 117 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 IGHV3-48P01763 117 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 MST1LQ2TV78 715 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 SIGLEC12Q96PQ1 595 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 TRAV21A0A0B4J279 112 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 PLXNB1O43157 2135 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 MYO18BQ8IUG5 2567 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 TGFAP01135 160 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 ADAMTSL1Q8N6G6 1762 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 LYPD1Q8N2G4 141 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 CELA2AP08217 269 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 RSPO3Q9BXY4 272 aaPredicted RBP6.84□□□□□ -1.31
APOB-201ENST00000233242 MLNRO43193 412 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 TNFRSF6BO95407 300 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 MORN2Q502X0 79 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 TMEM86BQ8N661 226 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 PLSCR4Q9NRQ2 329 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 UBR3Q6ZT12 1888 aa6.84□□□□□ -1.32
APOB-201ENST00000233242 RNF115Q9Y4L5 304 aa6.84□□□□□ -1.32
APOB-201ENST00000233242 IGKV1D-8A0A087WSZ0 117 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 ZNF562Q6V9R5 426 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 TMEM171Q8WVE6 324 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 SMRP1Q8NCR6 262 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 EFEMP2O95967 443 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 D6R8Y8 96 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 INAFM2P0DMQ5 153 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 IGLC2P0DOY2 106 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 IGLC3P0DOY3 106 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 GATA2P23769 480 aaPredicted RBP6.83□□□□□ -1.32
APOB-201ENST00000233242 ZNF48Q96MX3 618 aaPredicted RBP6.83□□□□□ -1.32
APOB-201ENST00000233242 CDKN1BP46527 198 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 CFAP161Q6P656 301 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 LYZL4Q96KX0 146 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 CHAC1Q9BUX1 264 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 PFN1P07737 140 aaKnown RBP6.83□□□□□ -1.32
APOB-201ENST00000233242 JMJD8Q96S16 334 aa6.83□□□□□ -1.32
APOB-201ENST00000233242 TCRAP04437 139 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 CD300EQ496F6 205 aaPredicted RBP6.82□□□□□ -1.32
APOB-201ENST00000233242 DUX5Q96PT3 197 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 GTF3C1Q12789 2109 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 K7EP13 123 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 RNASE4P34096 147 aaKnown RBP6.82□□□□□ -1.32
APOB-201ENST00000233242 TRAV12-3A0A0B4J271 114 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 PPP1R27Q86WC6 154 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 TRGV11A0A075B6L2 103 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 PYYP10082 97 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 MYOD1P15172 320 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 NEGR1Q7Z3B1 354 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 MALRD1Q5VYJ5 2156 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 TEX43Q6ZNM6 134 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 ATP6V0BQ99437 205 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 IGHV2OR16-5A0A0B4J2B6 119 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 CRPP02741 224 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 CECR9P0C854 216 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 CD28P10747 220 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 CRYGSP22914 178 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 QRFPP83859 136 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 SFTA2Q6UW10 78 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 COL5A3P25940 1745 aaPredicted RBP6.82□□□□□ -1.32
APOB-201ENST00000233242 ANK1P16157 1881 aa6.82□□□□□ -1.32
APOB-201ENST00000233242 NBR2O15453 112 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 TMEM155Q4W5P6 130 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 FBXL15Q9H469 300 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 FOXH1O75593 365 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 TOMM40O96008 361 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 LHFPL4Q7Z7J7 247 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 OVOL1O14753 267 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 TRGV3P03979 118 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 PRTN3P24158 256 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 SPSB3Q6PJ21 355 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 CLEC2AQ6UVW9 174 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 ABHD17AQ96GS6 310 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 YPEL3P61236 119 aaPredicted RBP6.81□□□□□ -1.32
APOB-201ENST00000233242 DNAJC30Q96LL9 226 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 UCNP55089 124 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 RNF5Q99942 180 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 IGKV3D-15A0A087WSY6 115 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 IGKV3-15P01624 115 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 NPSP0C0P6 89 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 ZNF492Q9P255 531 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 A0A087WV48 116 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 NPFFR1Q9GZQ6 430 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 GTSCR1Q86UQ5 136 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 SBF2Q86WG5 1849 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 GFRA3O60609 400 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 TAL2Q16559 108 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 PRR7Q8TB68 274 aa6.81□□□□□ -1.32
APOB-201ENST00000233242 PHLDA1Q8WV24 401 aaPredicted RBP6.8□□□□□ -1.32
APOB-201ENST00000233242 PSG7Q13046 419 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 TNCP24821 2201 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 IGLV3-12A0A075B6K2 115 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 TMEM42Q69YG0 159 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 ASCL4Q6XD76 172 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 DUSP14O95147 198 aaKnown RBP6.8□□□□□ -1.32
APOB-201ENST00000233242 ZC2HC1BQ5TFG8 222 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms