RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 MSMPQ1L6U9 139 aa11.63□□□□□ -0.55
SFXN3-201ENST00000224807 RUSC1-AS1Q66K80 236 aa11.63□□□□□ -0.55
SFXN3-201ENST00000224807 PMS2CLQ68D20 193 aa11.63□□□□□ -0.55
SFXN3-201ENST00000224807 PRSS3P2Q8NHM4 247 aa11.63□□□□□ -0.55
SFXN3-201ENST00000224807 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
SFXN3-201ENST00000224807 MGST3O14880 152 aa11.63□□□□□ -0.55
SFXN3-201ENST00000224807 CCL8P80075 99 aa11.63□□□□□ -0.55
SFXN3-201ENST00000224807 JPT1Q9UK76 154 aa11.63□□□□□ -0.55
SFXN3-201ENST00000224807 C9orf172C9J069 976 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 NCR2O95944 276 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 LRRC10Q5BKY1 277 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 BPIFA4PQ86YQ2 179 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 EXOC3-AS1Q8N2X6 119 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 DSCAMO60469 2012 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 K7EP13 123 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 APOHP02749 345 aaPredicted RBP11.62□□□□□ -0.55
SFXN3-201ENST00000224807 FAM106CPP0CH98 169 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 SRSF6Q13247 344 aaKnown RBP11.62□□□□□ -0.55
SFXN3-201ENST00000224807 FAM106AQ4KMX7 169 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 AARDQ4LEZ3 155 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 DHRS13Q6UX07 377 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 ZNF329Q86UD4 541 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 MTURNQ8N3F0 131 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 GTSF1Q8WW33 167 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 MRPL20Q9BYC9 149 aaKnown RBP11.62□□□□□ -0.55
SFXN3-201ENST00000224807 TMEM14BQ9NUH8 114 aa11.62□□□□□ -0.55
SFXN3-201ENST00000224807 K7ERU9 68 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 GPR183P32249 361 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 ERHP84090 104 aaKnown RBP11.61□□□□□ -0.55
SFXN3-201ENST00000224807 GOLT1AQ6ZVE7 132 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 C18orf15Q96N68 181 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 THYN1Q9P016 225 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 SLC25A17O43808 307 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 RTL8BQ17RB0 113 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 MBD6Q96DN6 1003 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 MRPL27Q9P0M9 148 aaKnown RBP11.61□□□□□ -0.55
SFXN3-201ENST00000224807 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 GNG7O60262 68 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 TNFSF15O95150 251 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 LYZP61626 148 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 PATE2Q6UY27 113 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 IGFBPL1Q8WX77 278 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 SRSF12Q8WXF0 261 aaKnown RBP11.61□□□□□ -0.55
SFXN3-201ENST00000224807 FAM167A-AS1Q96KT0 104 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 TPSG1Q9NRR2 321 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 APC2O95996 2303 aa11.61□□□□□ -0.55
SFXN3-201ENST00000224807 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
SFXN3-201ENST00000224807 CD69Q07108 199 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 PNKDQ8N490 385 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 TTTY13Q9BZ97 58 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 PRNDQ9UKY0 176 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 LY96Q9Y6Y9 160 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 DSCAML1Q8TD84 2053 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 MALRD1Q5VYJ5 2156 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 TMPRSS3P57727 454 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 COX19Q49B96 90 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 TMEM164Q5U3C3 297 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 C12orf54Q6X4T0 127 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 WDR31Q8NA23 367 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 OR1L4Q8NGR5 311 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 CHODLQ9H9P2 273 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 SLC25A10Q9UBX3 287 aaPredicted RBP11.6□□□□□ -0.55
SFXN3-201ENST00000224807 PTPRBP23467 1997 aa11.6□□□□□ -0.55
SFXN3-201ENST00000224807 ZZEF1O43149 2961 aa11.59□□□□□ -0.55
SFXN3-201ENST00000224807 CT45A6P0DMU7 189 aa11.59□□□□□ -0.55
SFXN3-201ENST00000224807 CT45A5P0DMU8 189 aa11.59□□□□□ -0.55
SFXN3-201ENST00000224807 CT45A7P0DMV0 189 aa11.59□□□□□ -0.55
SFXN3-201ENST00000224807 FA2HQ7L5A8 372 aa11.59□□□□□ -0.55
SFXN3-201ENST00000224807 UPK2O00526 184 aa11.59□□□□□ -0.55
SFXN3-201ENST00000224807 NBEAP1P0C6P0 100 aa11.59□□□□□ -0.55
SFXN3-201ENST00000224807 C17orf58Q2M2W7 97 aa11.59□□□□□ -0.55
SFXN3-201ENST00000224807 RPP21Q9H633 154 aaKnown RBP11.59□□□□□ -0.55
SFXN3-201ENST00000224807 FOXA2Q9Y261 457 aaPredicted RBP11.59□□□□□ -0.55
SFXN3-201ENST00000224807 C21orf140B9A014 251 aa11.58□□□□□ -0.55
SFXN3-201ENST00000224807 HLA-DRB1P01911 266 aa11.58□□□□□ -0.55
SFXN3-201ENST00000224807 PRCDQ00LT1 54 aa11.58□□□□□ -0.55
SFXN3-201ENST00000224807 LOXL1Q08397 574 aaPredicted RBP11.58□□□□□ -0.55
SFXN3-201ENST00000224807 GUSBP1Q15486 140 aa11.58□□□□□ -0.55
SFXN3-201ENST00000224807 C9orf106Q8NAJ2 232 aa11.58□□□□□ -0.55
SFXN3-201ENST00000224807 SH3BGRL2Q9UJC5 107 aa11.58□□□□□ -0.55
SFXN3-201ENST00000224807 ZNF257Q9Y2Q1 563 aa11.58□□□□□ -0.55
SFXN3-201ENST00000224807 A8MWL6 223 aa11.58□□□□□ -0.56
SFXN3-201ENST00000224807 OR10X1Q8NGY0 326 aa11.58□□□□□ -0.56
SFXN3-201ENST00000224807 EPDR1Q9UM22 224 aa11.58□□□□□ -0.56
SFXN3-201ENST00000224807 ASH1LQ9NR48 2969 aaKnown RBP11.58□□□□□ -0.56
SFXN3-201ENST00000224807 TRGV8A0A0C4DH27 118 aa11.58□□□□□ -0.56
SFXN3-201ENST00000224807 ARMS2P0C7Q2 107 aa11.58□□□□□ -0.56
SFXN3-201ENST00000224807 DEFB125Q8N687 156 aa11.58□□□□□ -0.56
SFXN3-201ENST00000224807 OR1N2Q8NGR9 330 aa11.58□□□□□ -0.56
SFXN3-201ENST00000224807 IGHV3OR16-8A0A075B7F1 116 aa11.57□□□□□ -0.56
SFXN3-201ENST00000224807 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.57□□□□□ -0.56
SFXN3-201ENST00000224807 SMKR1H3BMG3 65 aa11.57□□□□□ -0.56
SFXN3-201ENST00000224807 CFHR2P36980 270 aa11.57□□□□□ -0.56
SFXN3-201ENST00000224807 BPIFB3P59826 476 aa11.57□□□□□ -0.56
SFXN3-201ENST00000224807 WT1-ASQ06250 92 aa11.57□□□□□ -0.56
SFXN3-201ENST00000224807 FAM90A1Q86YD7 464 aa11.57□□□□□ -0.56
SFXN3-201ENST00000224807 ST20Q9HBF5 79 aa11.57□□□□□ -0.56
SFXN3-201ENST00000224807 MAP1AP78559 2803 aaPredicted RBP11.57□□□□□ -0.56
SFXN3-201ENST00000224807 TMEM11P17152 192 aa11.57□□□□□ -0.56
SFXN3-201ENST00000224807 CSTL1Q9H114 145 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms