RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 RELQ04864 619 aaPredicted RBP10.77□□□□□ -0.69
SEC61B-201ENST00000223641 HSD17B11Q8NBQ5 300 aa10.77□□□□□ -0.69
SEC61B-201ENST00000223641 BPIFCQ8NFQ6 507 aa10.77□□□□□ -0.69
SEC61B-201ENST00000223641 OR11H1Q8NG94 326 aa10.77□□□□□ -0.69
SEC61B-201ENST00000223641 OR2G3Q8NGZ4 309 aa10.77□□□□□ -0.69
SEC61B-201ENST00000223641 Q8WTZ3 238 aa10.77□□□□□ -0.69
SEC61B-201ENST00000223641 ST8SIA2Q92186 375 aa10.77□□□□□ -0.69
SEC61B-201ENST00000223641 GNPNAT1Q96EK6 184 aaPredicted RBP10.77□□□□□ -0.69
SEC61B-201ENST00000223641 RAX2Q96IS3 184 aa10.77□□□□□ -0.69
SEC61B-201ENST00000223641 ZFAND3Q9H8U3 227 aa10.77□□□□□ -0.69
SEC61B-201ENST00000223641 NUDT19A8MXV4 375 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 C17orf112F2Z3M2 114 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 LINC01619G3V211 115 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 NDUFA4O00483 81 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 SEC11BP0C7V7 166 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 ZP3P21754 424 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 SERF2P84101 59 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 ZNF616Q08AN1 781 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 DEFB136Q30KP8 78 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 MIC13Q5XKP0 118 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 TOMM20LQ6UXN7 152 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 STPG3Q8N7X2 389 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 ZNF709Q8N972 641 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 OR51G1Q8NGK1 321 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 OR1N2Q8NGR9 330 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 KCNIP2Q9NS61 270 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 SLC39A9Q9NUM3 307 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 PUS1Q9Y606 427 aaKnown RBP eCLIP10.76□□□□□ -0.69
SEC61B-201ENST00000223641 RFNGQ9Y644 331 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 PXMP4Q9Y6I8 212 aa10.76□□□□□ -0.69
SEC61B-201ENST00000223641 A0A1W2PRX2 142 aa10.75□□□□□ -0.69
SEC61B-201ENST00000223641 CCL24O00175 119 aa10.75□□□□□ -0.69
SEC61B-201ENST00000223641 YIF1AO95070 293 aa10.75□□□□□ -0.69
SEC61B-201ENST00000223641 HOXD3P31249 432 aaPredicted RBP10.75□□□□□ -0.69
SEC61B-201ENST00000223641 B2MP61769 119 aa10.75□□□□□ -0.69
SEC61B-201ENST00000223641 KLF5Q13887 457 aaPredicted RBP10.75□□□□□ -0.69
SEC61B-201ENST00000223641 PXDC1Q5TGL8 231 aa10.75□□□□□ -0.69
SEC61B-201ENST00000223641 C12orf54Q6X4T0 127 aa10.75□□□□□ -0.69
SEC61B-201ENST00000223641 SH3BGRL3Q9H299 93 aa10.75□□□□□ -0.69
SEC61B-201ENST00000223641 SLC25A32Q9H2D1 315 aa10.75□□□□□ -0.69
SEC61B-201ENST00000223641 COL6A5A8TX70 2615 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 IGHV3-35A0A0C4DH35 117 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 LGALS9O00182 355 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 TSPAN15O95858 294 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 MYCNOSP40205 109 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 RPEL1Q2QD12 228 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 NSUN5P1Q3KNT7 163 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 UNQ9165/PRO28630Q6UXU0 137 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 REC114Q7Z4M0 266 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 TMEM190Q8WZ59 177 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 DPF1Q92782 380 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 RNF125Q96EQ8 232 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 PHYHIPLQ96FC7 376 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 RCC1LQ96I51 464 aaKnown RBP10.74□□□□□ -0.69
SEC61B-201ENST00000223641 PLA2G2EQ9NZK7 142 aa10.74□□□□□ -0.69
SEC61B-201ENST00000223641 MRPL27Q9P0M9 148 aaKnown RBP10.74□□□□□ -0.69
SEC61B-201ENST00000223641 IL4P05112 153 aa10.73□□□□□ -0.69
SEC61B-201ENST00000223641 USF2Q15853 346 aaPredicted RBP10.73□□□□□ -0.69
SEC61B-201ENST00000223641 FAM106AQ4KMX7 169 aa10.73□□□□□ -0.69
SEC61B-201ENST00000223641 SHISA2Q6UWI4 295 aa10.73□□□□□ -0.69
SEC61B-201ENST00000223641 PATE2Q6UY27 113 aa10.73□□□□□ -0.69
SEC61B-201ENST00000223641 Q6ZRG5 221 aa10.73□□□□□ -0.69
SEC61B-201ENST00000223641 C3orf56Q8N813 242 aa10.73□□□□□ -0.69
SEC61B-201ENST00000223641 TMEM37Q8WXS4 190 aa10.73□□□□□ -0.69
SEC61B-201ENST00000223641 DUX3Q96PT4 197 aa10.73□□□□□ -0.69
SEC61B-201ENST00000223641 MDFIQ99750 246 aa10.73□□□□□ -0.69
SEC61B-201ENST00000223641 ELOA3CA0A087WX78 387 aaPredicted RBP10.72□□□□□ -0.69
SEC61B-201ENST00000223641 A8MWP6 167 aa10.72□□□□□ -0.69
SEC61B-201ENST00000223641 K7EMT4 169 aa10.72□□□□□ -0.69
SEC61B-201ENST00000223641 SLURP1P55000 103 aa10.72□□□□□ -0.69
SEC61B-201ENST00000223641 ELLP55199 621 aaPredicted RBP10.72□□□□□ -0.69
SEC61B-201ENST00000223641 FFAR4Q5NUL3 377 aa10.72□□□□□ -0.69
SEC61B-201ENST00000223641 EIF5AL1Q6IS14 154 aaKnown RBP10.72□□□□□ -0.69
SEC61B-201ENST00000223641 C1QL4Q86Z23 238 aa10.72□□□□□ -0.69
SEC61B-201ENST00000223641 TMED6Q8WW62 240 aa10.72□□□□□ -0.69
SEC61B-201ENST00000223641 MBP02144 154 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 M6PRP20645 277 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 CRYBB3P26998 211 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 LYZP61626 148 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 KRTAP21-3Q3LHN1 58 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 GCSAMLQ5JQS6 135 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 TEX261Q6UWH6 196 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 OR1L4Q8NGR5 311 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 GATAD1Q8WUU5 269 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 DLX4Q92988 240 aaPredicted RBP10.71□□□□□ -0.69
SEC61B-201ENST00000223641 PFDN5Q99471 154 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 VSIRQ9H7M9 311 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 DNAJC4Q9NNZ3 241 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 RPRMQ9NS64 109 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 U3KQE9 123 aa10.71□□□□□ -0.69
SEC61B-201ENST00000223641 STAB1Q9NY15 2570 aa10.71□□□□□ -0.7
SEC61B-201ENST00000223641 UMAD1C9J7I0 102 aa10.7□□□□□ -0.7
SEC61B-201ENST00000223641 HYPMO75409 117 aa10.7□□□□□ -0.7
SEC61B-201ENST00000223641 OR5G3P0C626 314 aa10.7□□□□□ -0.7
SEC61B-201ENST00000223641 ORM2P19652 201 aa10.7□□□□□ -0.7
SEC61B-201ENST00000223641 SYNJ2BPP57105 145 aa10.7□□□□□ -0.7
SEC61B-201ENST00000223641 ACOT6Q3I5F7 207 aaPredicted RBP10.7□□□□□ -0.7
SEC61B-201ENST00000223641 RPP25LQ8N5L8 163 aaKnown RBP10.7□□□□□ -0.7
SEC61B-201ENST00000223641 OR4F17Q8NGA8 305 aa10.7□□□□□ -0.7
SEC61B-201ENST00000223641 OR1B1Q8NGR6 318 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms