RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 K7EPK0 472 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 SIX6O95475 246 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 RBMY1DP0C7P1 496 aaKnown RBP9.46□□□□□ -0.9
LSM5-201ENST00000223084 METTL15P1P0C7V9 234 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 OR2F1Q13607 317 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 GSG1LQ6UXU4 331 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 ACOT7LQ6ZUV0 252 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 WFDC3Q8IUB2 231 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 OR51G1Q8NGK1 321 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 RAB40CQ96S21 281 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 MARVELD1Q9BSK0 173 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 GPN1Q9HCN4 374 aaPredicted RBP9.46□□□□□ -0.9
LSM5-201ENST00000223084 C7orf66A4D0T2 115 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 HNRNPCP07910 306 aaKnown RBP eCLIP9.45□□□□□ -0.9
LSM5-201ENST00000223084 BMI1P35226 326 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 P2RY1P47900 373 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 TAS2R30P59541 319 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 RPL11P62913 178 aaKnown RBP9.45□□□□□ -0.9
LSM5-201ENST00000223084 HAGHQ16775 308 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 TMEM14EPQ6UXP3 125 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 THAP8Q8NA92 274 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 CITED4Q96RK1 184 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 TRGV9Q99603 122 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 PBDC1Q9BVG4 233 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 U3KQE9 123 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 U3KQK5 164 aa9.45□□□□□ -0.9
LSM5-201ENST00000223084 A0A1W2PS18 150 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 SMCO3A2RU48 225 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 OR4C46A6NHA9 309 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 SNRPGP15A8MWD9 76 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 L7N2F9 121 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 GOSR2O14653 212 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 PRAF2O60831 178 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 TSC22D2O75157 780 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 S100A10P60903 97 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 LYZP61626 148 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 RRAS2P62070 204 aaPredicted RBP9.44□□□□□ -0.9
LSM5-201ENST00000223084 VAMP2P63027 116 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 AKR1C1Q04828 323 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 ARL16Q0P5N6 197 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 IL15RAQ13261 267 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 RAB32Q13637 225 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 LINC00322Q6ZN03 302 aaPredicted RBP9.44□□□□□ -0.9
LSM5-201ENST00000223084 NARS2Q96I59 477 aaKnown RBP9.44□□□□□ -0.9
LSM5-201ENST00000223084 MS4A6AQ9H2W1 248 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 TMEM231Q9H6L2 316 aa9.44□□□□□ -0.9
LSM5-201ENST00000223084 DNASE2O00115 360 aaPredicted RBP9.43□□□□□ -0.9
LSM5-201ENST00000223084 PTTG1O95997 202 aa9.43□□□□□ -0.9
LSM5-201ENST00000223084 GATA2P23769 480 aaPredicted RBP9.43□□□□□ -0.9
LSM5-201ENST00000223084 BCAP31P51572 246 aa9.43□□□□□ -0.9
LSM5-201ENST00000223084 ZNF124Q15973 351 aa9.43□□□□□ -0.9
LSM5-201ENST00000223084 C16orf54Q6UWD8 224 aa9.43□□□□□ -0.9
LSM5-201ENST00000223084 TMEM182Q6ZP80 229 aaPredicted RBP9.43□□□□□ -0.9
LSM5-201ENST00000223084 FAM24BQ8N5W8 94 aa9.43□□□□□ -0.9
LSM5-201ENST00000223084 RNF125Q96EQ8 232 aa9.43□□□□□ -0.9
LSM5-201ENST00000223084 TM2D3Q9BRN9 247 aa9.43□□□□□ -0.9
LSM5-201ENST00000223084 C11orf1Q9H5F2 150 aa9.43□□□□□ -0.9
LSM5-201ENST00000223084 RABAC1Q9UI14 185 aa9.43□□□□□ -0.9
LSM5-201ENST00000223084 TENM3Q9P273 2699 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 FAM24AA6NFZ4 105 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 FABP1P07148 127 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 PAFAH1B2P68402 229 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 DLK1P80370 383 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 TMEM144Q7Z5S9 345 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 APRG1Q8IVJ8 170 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 STPG3Q8N7X2 389 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 STXBP6Q8NFX7 210 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 OR10P1Q8NGE3 313 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 GRAMD2BQ96HH9 432 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 RCHY1Q96PM5 261 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 RETNQ9HD89 108 aa9.42□□□□□ -0.9
LSM5-201ENST00000223084 BUB3O43684 328 aa9.41□□□□□ -0.9
LSM5-201ENST00000223084 CST7O76096 145 aa9.41□□□□□ -0.9
LSM5-201ENST00000223084 CD5P06127 495 aa9.41□□□□□ -0.9
LSM5-201ENST00000223084 EIF2B2P49770 351 aaKnown RBP9.41□□□□□ -0.9
LSM5-201ENST00000223084 CAV2P51636 162 aa9.41□□□□□ -0.9
LSM5-201ENST00000223084 RGS21Q2M5E4 152 aa9.41□□□□□ -0.9
LSM5-201ENST00000223084 ZMAT4Q9H898 229 aa9.41□□□□□ -0.9
LSM5-201ENST00000223084 MAP6D1Q9H9H5 199 aa9.41□□□□□ -0.9
LSM5-201ENST00000223084 AGRNO00468 2067 aa9.4□□□□□ -0.9
LSM5-201ENST00000223084 LOC102724200A0A096LPH7 203 aaPredicted RBP9.4□□□□□ -0.9
LSM5-201ENST00000223084 IGSF23A1L1A6 192 aa9.4□□□□□ -0.9
LSM5-201ENST00000223084 SSNA1O43805 119 aa9.4□□□□□ -0.9
LSM5-201ENST00000223084 PVALBP20472 110 aaPredicted RBP9.4□□□□□ -0.9
LSM5-201ENST00000223084 CYP2G1PQ6ZSU1 146 aa9.4□□□□□ -0.9
LSM5-201ENST00000223084 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
LSM5-201ENST00000223084 MGAT4CQ9UBM8 478 aa9.4□□□□□ -0.9
LSM5-201ENST00000223084 STAB2Q8WWQ8 2551 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 TRAV2A0A0B4J234 112 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 K7EQG2 157 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 RPL35AP18077 110 aaKnown RBP9.39□□□□□ -0.91
LSM5-201ENST00000223084 ORM2P19652 201 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 H2BFSP57053 126 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 DEFB131AP59861 70 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 SLC38A11Q08AI6 406 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 LRRC37A5PQ49AS3 106 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 LEMD1Q68G75 181 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 BPIFCQ8NFQ6 507 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms