RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
CNOT3-201ENST00000221232 C16orf54Q6UWD8 224 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 OR1L4Q8NGR5 311 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 FXYD5Q96DB9 178 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 MRPL32Q9BYC8 188 aaKnown RBP11.72□□□□□ -0.53
CNOT3-201ENST00000221232 CD3EP07766 207 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 NTF3P20783 257 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 APOBEC3AP31941 199 aaPredicted RBP11.72□□□□□ -0.53
CNOT3-201ENST00000221232 ATP5IP56385 69 aaPredicted RBP11.72□□□□□ -0.53
CNOT3-201ENST00000221232 ASCL5Q7RTU5 278 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 SIGLECL1Q8N7X8 197 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 NUDT10Q8NFP7 164 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 NUDT11Q96G61 164 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 GNB1LQ9BYB4 327 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 NGBQ9NPG2 151 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 MC5RP33032 325 aa11.71□□□□□ -0.53
CNOT3-201ENST00000221232 ONECUT1Q9UBC0 465 aa11.71□□□□□ -0.53
CNOT3-201ENST00000221232 CDC42EP3Q9UKI2 254 aa11.71□□□□□ -0.53
CNOT3-201ENST00000221232 AMTP48728 403 aa11.71□□□□□ -0.54
CNOT3-201ENST00000221232 ZNF841Q6ZN19 808 aa11.71□□□□□ -0.54
CNOT3-201ENST00000221232 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.54
CNOT3-201ENST00000221232 HILPDAQ9Y5L2 63 aa11.71□□□□□ -0.54
CNOT3-201ENST00000221232 SLAQ13239 276 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 PNKDQ8N490 385 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 ZNF835Q9Y2P0 537 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 PPIAL4CA0A0B4J2A2 164 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 IGHV1-3A0A0C4DH29 117 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 BMPR1BO00238 502 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 PPIAL4GP0DN37 164 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 LYZP61626 148 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 UBE2G1P62253 170 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 MUC15Q8N387 334 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 LINC00311Q8N616 119 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 OR4A5Q8NH83 315 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 FBXL7Q9UJT9 491 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 SIGLEC9Q9Y336 463 aa11.7□□□□□ -0.54
CNOT3-201ENST00000221232 ANKHD1Q8IWZ3 2542 aaKnown RBP11.7□□□□□ -0.54
CNOT3-201ENST00000221232 FSTL3O95633 263 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 APCSP02743 223 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 RBP4P02753 201 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 PAX1P15863 534 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 TCF24Q7RTU0 167 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 RPEQ96AT9 228 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 TBL2Q9Y4P3 447 aaKnown RBP11.69□□□□□ -0.54
CNOT3-201ENST00000221232 AKAP6Q13023 2319 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 TRAV8-1A0A0A6YYK1 113 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 SMIM27A0A1W2PRY6 76 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 CNIH1O95406 144 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 AMY1AP04745 511 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 LGALS7P47929 136 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 ARF6P62330 175 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 CDSNQ15517 529 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 C1orf194Q5T5A4 169 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 Q71RC1 249 aaPredicted RBP11.69□□□□□ -0.54
CNOT3-201ENST00000221232 SNHG12Q9BXW3 62 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 TRAV9-1A0A075B6T8 112 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 BUB1B-PAK6H3BSN5 160 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 PRRX1P54821 245 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 GDF5OSQ5U4N7 250 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 RNF2Q99496 336 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 ARL2-SNX15V9GYD0 113 aa11.69□□□□□ -0.54
CNOT3-201ENST00000221232 KLF17Q5JT82 389 aaPredicted RBP11.68□□□□□ -0.54
CNOT3-201ENST00000221232 LINC00322Q6ZN03 302 aaPredicted RBP11.68□□□□□ -0.54
CNOT3-201ENST00000221232 PPP1R27Q86WC6 154 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 KAAG1Q9UBP8 84 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 A0A1W2PS18 150 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 SIAH2O43255 324 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 HYPMO75409 117 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 GPX1P07203 203 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 BRS3P32247 399 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 BATFQ16520 125 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 LDLRAD2Q5SZI1 272 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 TPTE2P1Q5T6R2 138 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 ATOH7Q8N100 152 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 THAP8Q8NA92 274 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 PERPQ96FX8 193 aa11.68□□□□□ -0.54
CNOT3-201ENST00000221232 IZUMO1RA6ND01 250 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 B9A039 149 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 Q0VG73 95 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 CLEC7AQ9BXN2 247 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 NRN1Q9NPD7 142 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 SPTBN1Q01082 2364 aaKnown RBP11.67□□□□□ -0.54
CNOT3-201ENST00000221232 PSG1P11464 419 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 RPL19P84098 196 aaKnown RBP11.67□□□□□ -0.54
CNOT3-201ENST00000221232 RBPJQ06330 500 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 OR2D3Q8NGH3 330 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 ZNF596Q8TC21 504 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 C22orf15Q8WYQ4 148 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 WNK2Q9Y3S1 2297 aa11.67□□□□□ -0.54
CNOT3-201ENST00000221232 A6NNC1 897 aa11.66□□□□□ -0.54
CNOT3-201ENST00000221232 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
CNOT3-201ENST00000221232 IGLV1-47P01700 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms