RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 NEU4Q8WWR8 484 aaPredicted RBP12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 CRIM1Q9NZV1 1036 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 IGHV3-64A0A075B6Q5 118 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 GFRA3O60609 400 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 PMS2P5A8MQ11 134 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 TIMM23O14925 209 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 EFNA2O43921 213 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 PVRIGQ6DKI7 326 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 FAM168AQ92567 244 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 SRD5A1P18405 259 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 PLNP26678 52 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 SLC50A1Q9BRV3 221 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 CYTL1Q9NRR1 136 aa12.41□□□□□ -0.42
NDFIP2-201ENST00000218652 NCR2O95944 276 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 CKS1BP61024 79 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 PYY3Q5JQD4 70 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 SPATA31B1PQ5VZV4 182 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 RTN4RL2Q86UN3 420 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 PSPNO60542 156 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 RNF182Q8N6D2 247 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 HOXA3O43365 443 aaPredicted RBP12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 LTBRP36941 435 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 FAM57AQ8TBR7 257 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 LSM4Q9Y4Z0 139 aaKnown RBP12.4□□□□□ -0.42
NDFIP2-201ENST00000218652 C11orf44Q8N8P7 122 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 NHSL1Q5SYE7 1610 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 TRAV21A0A0B4J279 112 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 TNFSF13O75888 250 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 KLHDC3Q9BQ90 382 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 NDUFS6O75380 124 aaKnown RBP12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 PAX1P15863 534 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 MPZP25189 248 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 EXOC3-AS1Q8N2X6 119 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 ZFHX2Q9C0A1 2572 aaPredicted RBP12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 FXYD7P58549 80 aa12.39□□□□□ -0.43
NDFIP2-201ENST00000218652 TMEM242Q9NWH2 141 aa12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 MYO16Q9Y6X6 1858 aa12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 CRYGSP22914 178 aa12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 BMPERQ8N8U9 685 aa12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 SIGMAR1Q99720 223 aa12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 SLC25A15Q9Y619 301 aa12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 RBMY1A1P0DJD3 496 aaKnown RBP12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 RBMY1CP0DJD4 496 aa12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 ORMDL2Q53FV1 153 aa12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 FLVCR1-AS1Q8TAF5 88 aa12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 RPUSD1Q9UJJ7 312 aaKnown RBP12.38□□□□□ -0.43
NDFIP2-201ENST00000218652 LOC102723996A0A087X1L8 192 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 IGKCP01834 107 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 RNF144BQ7Z419 303 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 MED13Q9UHV7 2174 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 A8MWV9 139 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 SRSF6Q13247 344 aaKnown RBP12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 GTSCR1Q86UQ5 136 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 TMEM167AQ8TBQ9 72 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 IGKV1-27A0A075B6S5 117 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 C5orf63A6NC05 138 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 PINLYPA6NC86 204 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 MYOD1P15172 320 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 SAMD5Q5TGI4 173 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 ATP5L2Q7Z4Y8 100 aa12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 MTCL1Q9Y4B5 1905 aaKnown RBP12.37□□□□□ -0.43
NDFIP2-201ENST00000218652 QSER1Q2KHR3 1735 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 IGKV1-5P01602 117 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 PSG1P11464 419 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 KLF17Q5JT82 389 aaPredicted RBP12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 COLCA1Q6ZS62 124 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 CD28P10747 220 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 SEC11AP67812 179 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 TMEM42Q69YG0 159 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 ANAPC13Q9BS18 74 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 MRPS18CQ9Y3D5 142 aaKnown RBP12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 CHTOPQ9Y3Y2 248 aaKnown RBP12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 GAGE13Q4V321 117 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 NAV3Q8IVL0 2385 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 IGLV3-19P01714 112 aa12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 BCL6BQ8N143 479 aaPredicted RBP12.36□□□□□ -0.43
NDFIP2-201ENST00000218652 IGKV2-40A0A087WW87 121 aaPredicted RBP12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 TRAV8-1A0A0A6YYK1 113 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 IGKV2D-40P01614 121 aaPredicted RBP12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 RPL15P61313 204 aaKnown RBP12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 HSD52Q0P140 79 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 MPV17L2Q567V2 206 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 NMSQ5H8A3 153 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 C8orf46Q8TAG6 207 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 SHANK3Q9BYB0 1731 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 hDV102S1A0JD36 115 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 SRRM5B3KS81 715 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 CSRP2Q16527 193 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 RNASE6Q93091 150 aaKnown RBP12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 SCRT1Q9BWW7 348 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 IGHV1-18A0A0C4DH31 117 aa12.35□□□□□ -0.43
NDFIP2-201ENST00000218652 D6R8Y8 96 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms