RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 BEX4Q9NWD9 120 aaPredicted RBP13.7□□□□□ -0.22
VRK1-201ENST00000216639 AKAP6Q13023 2319 aa13.69□□□□□ -0.22
VRK1-201ENST00000216639 MDFIC2A0A1B0GVS7 189 aa13.69□□□□□ -0.22
VRK1-201ENST00000216639 HELTA6NFD8 242 aa13.69□□□□□ -0.22
VRK1-201ENST00000216639 IGHV4-38-2P0DP08 117 aa13.69□□□□□ -0.22
VRK1-201ENST00000216639 RPL35P42766 123 aaKnown RBP13.69□□□□□ -0.22
VRK1-201ENST00000216639 RPS10P46783 165 aaKnown RBP13.69□□□□□ -0.22
VRK1-201ENST00000216639 ATP6V0E1O15342 81 aa13.68□□□□□ -0.22
VRK1-201ENST00000216639 OR2J3O76001 311 aa13.68□□□□□ -0.22
VRK1-201ENST00000216639 ECSCRQ19T08 205 aa13.68□□□□□ -0.22
VRK1-201ENST00000216639 C1QL4Q86Z23 238 aa13.68□□□□□ -0.22
VRK1-201ENST00000216639 TXN2Q99757 166 aa13.68□□□□□ -0.22
VRK1-201ENST00000216639 SSX3Q99909 188 aa13.68□□□□□ -0.22
VRK1-201ENST00000216639 MRPL27Q9P0M9 148 aaKnown RBP13.68□□□□□ -0.22
VRK1-201ENST00000216639 TGIF2-C20orf24A0A0A6YYL0 155 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 TGOLN2O43493 480 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 NDUFB8O95169 186 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 CXCL1P09341 107 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 GALR1P47211 349 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 GNG4P50150 75 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 ZFP82Q8N141 532 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 VN1R17PQ8TDU5 208 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 FAM210BQ96KR6 192 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 SLC25A39Q9BZJ4 359 aaPredicted RBP13.67□□□□□ -0.22
VRK1-201ENST00000216639 BIN3Q9NQY0 253 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 FBXL7Q9UJT9 491 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 TRBV20OR9-2A0A075B6H5 130 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 TRBV24-1A0A075B6N3 115 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 SRP14P37108 136 aaKnown RBP13.67□□□□□ -0.22
VRK1-201ENST00000216639 KLK9Q2XQG4 91 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 KCNIP4Q6PIL6 250 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 OCC1Q8TAD7 63 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 C2CD4CQ8TF44 421 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 RNF125Q96EQ8 232 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 SFRP2Q96HF1 295 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 TMEM14CQ9P0S9 112 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 KLK9Q9UKQ9 250 aa13.67□□□□□ -0.22
VRK1-201ENST00000216639 J3QLI3 93 aa13.66□□□□□ -0.22
VRK1-201ENST00000216639 IL4P05112 153 aa13.66□□□□□ -0.22
VRK1-201ENST00000216639 NBEAP1P0C6P0 100 aa13.66□□□□□ -0.22
VRK1-201ENST00000216639 GP9P14770 177 aa13.66□□□□□ -0.22
VRK1-201ENST00000216639 FCGR2BP31994 310 aaPredicted RBP13.66□□□□□ -0.22
VRK1-201ENST00000216639 TMEM219Q86XT9 240 aa13.66□□□□□ -0.22
VRK1-201ENST00000216639 LRRC75A-AS1Q8N1F1 130 aa13.66□□□□□ -0.22
VRK1-201ENST00000216639 PIFOQ8TCI5 191 aa13.66□□□□□ -0.22
VRK1-201ENST00000216639 ELOVL1Q9BW60 279 aa13.66□□□□□ -0.22
VRK1-201ENST00000216639 AURKAIP1Q9NWT8 199 aaPredicted RBP13.66□□□□□ -0.22
VRK1-201ENST00000216639 S4R3C0 116 aa13.66□□□□□ -0.22
VRK1-201ENST00000216639 WI2-2373I1.2A0A1W2PRP0 233 aa13.65□□□□□ -0.22
VRK1-201ENST00000216639 PGPEP1LA6NFU8 196 aa13.65□□□□□ -0.22
VRK1-201ENST00000216639 ZNF329Q86UD4 541 aa13.65□□□□□ -0.22
VRK1-201ENST00000216639 ZNF491Q8N8L2 437 aa13.65□□□□□ -0.22
VRK1-201ENST00000216639 NECAP1Q8NC96 275 aa13.65□□□□□ -0.22
VRK1-201ENST00000216639 BLNKQ8WV28 456 aa13.65□□□□□ -0.22
VRK1-201ENST00000216639 RNF24Q9Y225 148 aa13.65□□□□□ -0.22
VRK1-201ENST00000216639 USP9XQ93008 2570 aaPredicted RBP13.65□□□□□ -0.22
VRK1-201ENST00000216639 S100A6P06703 90 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
VRK1-201ENST00000216639 COL8A1P27658 744 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 CNN1P51911 297 aaKnown RBP13.64□□□□□ -0.23
VRK1-201ENST00000216639 TAS2R60P59551 318 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 RANP62826 216 aaKnown RBP13.64□□□□□ -0.23
VRK1-201ENST00000216639 LOXL1Q08397 574 aaPredicted RBP13.64□□□□□ -0.23
VRK1-201ENST00000216639 DEFB113Q30KQ7 82 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 CENPWQ5EE01 88 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 IMMP2LQ96T52 175 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 SHANK2-AS3Q9BTD1 123 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 GAR1Q9NY12 217 aaKnown RBP13.64□□□□□ -0.23
VRK1-201ENST00000216639 PITPNC1Q9UKF7 332 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 ZNF462Q96JM2 2506 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 MED13LQ71F56 2210 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 A0A096LNT2 108 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 M0QZK8 103 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 S100A7P31151 101 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 LEMD1Q68G75 181 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 OR10G8Q8NGN5 311 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 TMEM190Q8WZ59 177 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 BTF3L4Q96K17 158 aa13.64□□□□□ -0.23
VRK1-201ENST00000216639 SPTAN1Q13813 2472 aaKnown RBP13.64□□□□□ -0.23
VRK1-201ENST00000216639 F8W735 103 aaPredicted RBP13.63□□□□□ -0.23
VRK1-201ENST00000216639 H3BRN7 92 aa13.63□□□□□ -0.23
VRK1-201ENST00000216639 H3BUX3 64 aa13.63□□□□□ -0.23
VRK1-201ENST00000216639 PEX7O00628 323 aa13.63□□□□□ -0.23
VRK1-201ENST00000216639 HIST1H1EP10412 219 aaKnown RBP13.63□□□□□ -0.23
VRK1-201ENST00000216639 HNF1AP20823 631 aa13.63□□□□□ -0.23
VRK1-201ENST00000216639 TEX38Q6PEX7 206 aa13.63□□□□□ -0.23
VRK1-201ENST00000216639 ZNF600Q6ZNG1 722 aa13.63□□□□□ -0.23
VRK1-201ENST00000216639 BPIFA4PQ86YQ2 179 aa13.63□□□□□ -0.23
VRK1-201ENST00000216639 CDC42EP3Q9UKI2 254 aa13.63□□□□□ -0.23
VRK1-201ENST00000216639 ABCA2Q9BZC7 2435 aa13.63□□□□□ -0.23
VRK1-201ENST00000216639 COL12A1Q99715 3063 aa13.62□□□□□ -0.23
VRK1-201ENST00000216639 TRBV9A0A0B4J1U6 114 aa13.62□□□□□ -0.23
VRK1-201ENST00000216639 SH2D7A6NKC9 451 aaPredicted RBP13.62□□□□□ -0.23
VRK1-201ENST00000216639 SLC25A5P05141 298 aaKnown RBP13.62□□□□□ -0.23
VRK1-201ENST00000216639 MYCNOSP40205 109 aa13.62□□□□□ -0.23
VRK1-201ENST00000216639 RHOGP84095 191 aa13.62□□□□□ -0.23
VRK1-201ENST00000216639 C15orf32Q32M92 178 aa13.62□□□□□ -0.23
VRK1-201ENST00000216639 PYGO2Q9BRQ0 406 aa13.62□□□□□ -0.23
VRK1-201ENST00000216639 SAV1Q9H4B6 383 aaPredicted RBP13.62□□□□□ -0.23
VRK1-201ENST00000216639 TACC2O95359 2948 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms