RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 S4R3C0 116 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 CELSR2Q9HCU4 2923 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 IGHV2-70DA0A0C4DH43 119 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 H3BTX0 84 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 K7EIM0 57 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 MGST1P10620 155 aaKnown RBP6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 S100A2P29034 98 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 NDPQ00604 133 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 TIGITQ495A1 244 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 ASPHD1Q5U4P2 390 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 ZNF329Q86UD4 541 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 IGF2BP2-AS1Q96M15 143 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 RASL11BQ9BPW5 248 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 GNG5P63218 68 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 SRSF8Q9BRL6 282 aaKnown RBP6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 NIT2Q9NQR4 276 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 IL36BQ9NZH7 164 aa6.32□□□□□ -1.4
HMGXB4-201ENST00000216106 TRAV34A0A0B4J273 112 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 IGLV2-8P01709 118 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 FABP4P15090 132 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 CX3CL1P78423 397 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 RBM14Q96PK6 669 aaKnown RBP6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 PITPNC1Q9UKF7 332 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 V9GYV3 84 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 ABCA2Q9BZC7 2435 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 USP9XQ93008 2570 aaPredicted RBP6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 XKRY2A2RUG3 117 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 PEX7O00628 323 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 IGKV1-17P01599 117 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 LMO4P61968 165 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 MINOS1Q5TGZ0 78 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 ARPC1AQ92747 370 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 TBX15Q96SF7 602 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 RPH3ALQ9UNE2 315 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 TRAPPC1Q9Y5R8 145 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 MINOS1-NBL1R4GNA1 71 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 CACNA1BQ00975 2339 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 IGHV4-39P01824 125 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 GP9P14770 177 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 TMEM11P17152 192 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 RPL15P61313 204 aaKnown RBP6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 STXBP6Q8NFX7 210 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 CDC42EP3Q9UKI2 254 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 HIGD1AQ9Y241 93 aa6.31□□□□□ -1.4
HMGXB4-201ENST00000216106 NBEAP1P0C6P0 100 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 CNN1P51911 297 aaKnown RBP6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 PLP1P60201 277 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 RPEL1Q2QD12 228 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 PYY3Q5JQD4 70 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 Q8N6K4 173 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 SGK494Q96LW2 274 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 OVOL3O00110 214 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 ISLRO14498 428 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 RD3LP0DJH9 198 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 ZNF562Q6V9R5 426 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 TMEM183AQ8IXX5 376 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 BTF3L4Q96K17 158 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 MYO18BQ8IUG5 2567 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 PGPA6NDG6 321 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 OOSP1A8MZH6 123 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 GCGP01275 180 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 SLC25A5P05141 298 aaKnown RBP6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 HIST1H1BP16401 226 aaKnown RBP6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 SAA4P35542 130 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 MYCNOSP40205 109 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 FAM120AOSQ5T036 256 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 IBA57Q5T440 356 aaKnown RBP6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 ZNF600Q6ZNG1 722 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 OR8I2Q8N0Y5 310 aa6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 SLC25A39Q9BZJ4 359 aaPredicted RBP6.3□□□□□ -1.4
HMGXB4-201ENST00000216106 SPINK4O60575 86 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 FRMD6-AS1P0C7T7 363 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 CBLN1P23435 193 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 UBE2E1P51965 193 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 TCL1AP56279 114 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 FANCD2OSQ96PS1 177 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 SERTAD4Q9NUC0 356 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 DOPEY1Q5JWR5 2465 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 SPG11Q96JI7 2443 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 ZFYVE26Q68DK2 2539 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 CA1P00915 261 aaPredicted RBP6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 TAS2R60P59551 318 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 SLC35B1P78383 322 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 CDPF1Q6NVV7 123 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 HIST1H2BLQ99880 126 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 TBL2Q9Y4P3 447 aaKnown RBP6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 USP24Q9UPU5 2620 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 TMEM8BA6NDV4 472 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 EBI3Q14213 229 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 PRR27Q6MZM9 219 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 BAGE2Q86Y30 109 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 OR1L6Q8NGR2 347 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 AJUBAQ96IF1 538 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 PACRGQ96M98 296 aaPredicted RBP6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 OSTCQ9NRP0 149 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 EPDR1Q9UM22 224 aa6.29□□□□□ -1.4
HMGXB4-201ENST00000216106 IGLV11-55A0A075B6I3 123 aa6.28□□□□□ -1.4
HMGXB4-201ENST00000216106 NPIPB5A8MRT5 1133 aa6.28□□□□□ -1.4
HMGXB4-201ENST00000216106 IGHV3-23P01764 117 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms