RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 CTXND1A0A1B0GTU2 59 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 ZNF343Q6P1L6 599 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 SSX7Q7RTT5 188 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 KLHDC1Q8N7A1 406 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 OR51G1Q8NGK1 321 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 OR1L4Q8NGR5 311 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 Q8WTZ3 238 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 GATAD1Q8WUU5 269 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 SFT2D1Q8WV19 159 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
SNRPD3-201ENST00000215829 ELOA3CA0A087WX78 387 aaPredicted RBP12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 TGOLN2O43493 480 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 NDUFA7O95182 113 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 IGHV3-11P01762 117 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 RPLP1P05386 114 aaKnown RBP12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 RHOBP62745 196 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 SPSB3Q6PJ21 355 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 PATE2Q6UY27 113 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 MYOZ3Q8TDC0 251 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 PFDN5Q99471 154 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 SLC25A22Q9H936 323 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 SEPSECSQ9HD40 501 aaKnown RBP12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 MED9Q9NWA0 146 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 NF1P21359 2839 aa12.34□□□□□ -0.43
SNRPD3-201ENST00000215829 TRAV1-1A0A0B4J248 108 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 COX7A2P2O60397 106 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 HYPMO75409 117 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 OR5G3P0C626 314 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 ORM2P19652 201 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 LCN15Q6UWW0 184 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 ZNF491Q8N8L2 437 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 OR4X2Q8NGF9 303 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 OR1B1Q8NGR6 318 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 LINC01006Q8NI28 216 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 DOK5Q9P104 306 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 PFDN2Q9UHV9 154 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 WI2-2373I1.2A0A1W2PRP0 233 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 OR2C1O95371 312 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 HBE1P02100 147 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 C10orf113Q5VZT2 155 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 ZNF600Q6ZNG1 722 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 SLC7A5P1Q8MH63 180 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 OR5AU1Q8NGC0 362 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 RNF2Q99496 336 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
SNRPD3-201ENST00000215829 MAP1LC3B2A6NCE7 125 aa12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 PPP5D1E7EU14 171 aa12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 TEX46H3BTG2 121 aa12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 HMGB3O15347 200 aaKnown RBP12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 EIF3GO75821 320 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 ARL3P36405 182 aa12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 LYZP61626 148 aa12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 FAM209BQ5JX69 171 aa12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 WIPF2Q8TF74 440 aaPredicted RBP12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 ZNF414Q96IQ9 312 aa12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 MAP1LC3BQ9GZQ8 125 aa12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 GNB4Q9HAV0 340 aa12.32□□□□□ -0.44
SNRPD3-201ENST00000215829 A0A1B0GV50 99 aa12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 IL4P05112 153 aa12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 CCL20P78556 96 aa12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 RELQ04864 619 aaPredicted RBP12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 SPATA31B1PQ5VZV4 182 aa12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 RNF125Q96EQ8 232 aa12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 MRPL32Q9BYC8 188 aaKnown RBP12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 MRPL27Q9P0M9 148 aaKnown RBP12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 PUS1Q9Y606 427 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNRPD3-201ENST00000215829 ANKRD34BA5PLL1 514 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 NUDT19A8MXV4 375 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 TRBV12-3P01733 135 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 STAG3L2P0CL84 134 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 STAG3L3P0CL85 134 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 IL34Q6ZMJ4 242 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 MIR17HGQ75NE6 70 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 COMMD7Q86VX2 200 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 OR4F5Q8NH21 305 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 MARC2Q969Z3 335 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 UHRF2Q96PU4 802 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 PBDC1Q9BVG4 233 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 PEF1Q9UBV8 284 aaKnown RBP12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 IGHV3-35A0A0C4DH35 117 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 LINC00305Q7Z4B0 112 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 HIGD1AQ9Y241 93 aa12.3□□□□□ -0.44
SNRPD3-201ENST00000215829 SRSF2Q01130 221 aaKnown RBP12.29□□□□□ -0.44
SNRPD3-201ENST00000215829 USF2Q15853 346 aaPredicted RBP12.29□□□□□ -0.44
SNRPD3-201ENST00000215829 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
SNRPD3-201ENST00000215829 TOMM20LQ6UXN7 152 aa12.29□□□□□ -0.44
SNRPD3-201ENST00000215829 OR5B12Q96R08 314 aa12.29□□□□□ -0.44
SNRPD3-201ENST00000215829 TECRQ9NZ01 308 aaKnown RBP12.29□□□□□ -0.44
SNRPD3-201ENST00000215829 CXorf1O96002 111 aa12.28□□□□□ -0.44
SNRPD3-201ENST00000215829 LGALS1P09382 135 aaKnown RBP12.28□□□□□ -0.44
SNRPD3-201ENST00000215829 C8orf88P0DMB2 117 aa12.28□□□□□ -0.44
SNRPD3-201ENST00000215829 TAS2R45P59539 299 aa12.28□□□□□ -0.44
SNRPD3-201ENST00000215829 MORN5Q5VZ52 161 aa12.28□□□□□ -0.44
SNRPD3-201ENST00000215829 ZFAND3Q9H8U3 227 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms