RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 Q6ZS49 121 aa9.53□□□□□ -0.88
DNMT3B-201ENST00000201963 NUDT10Q8NFP7 164 aa9.53□□□□□ -0.88
DNMT3B-201ENST00000201963 RAB1CQ92928 201 aa9.53□□□□□ -0.88
DNMT3B-201ENST00000201963 ZNF714Q96N38 554 aa9.53□□□□□ -0.88
DNMT3B-201ENST00000201963 TRAV3A0A0B4J244 114 aa9.53□□□□□ -0.88
DNMT3B-201ENST00000201963 J3QKU1 62 aa9.53□□□□□ -0.88
DNMT3B-201ENST00000201963 NUPR1O60356 82 aa9.53□□□□□ -0.88
DNMT3B-201ENST00000201963 CHODLQ9H9P2 273 aa9.53□□□□□ -0.88
DNMT3B-201ENST00000201963 LINC00473A8K010 186 aa9.52□□□□□ -0.88
DNMT3B-201ENST00000201963 ANOS1P23352 680 aa9.52□□□□□ -0.88
DNMT3B-201ENST00000201963 FCGR2BP31994 310 aaPredicted RBP9.52□□□□□ -0.88
DNMT3B-201ENST00000201963 Q6ZS92 163 aa9.52□□□□□ -0.88
DNMT3B-201ENST00000201963 PRELID3AQ96N28 172 aa9.52□□□□□ -0.88
DNMT3B-201ENST00000201963 KLK15Q9H2R5 256 aa9.52□□□□□ -0.88
DNMT3B-201ENST00000201963 KIR2DL5BA0A0G2JN68 375 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 KIR2DL5BA0A0G2JPC4 375 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 C15orf61A6NNL5 157 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 LHX2P50458 406 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 ZNF138P52744 262 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 RNFT1Q5M7Z0 435 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 KIR2DL5AQ8N109 375 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 FAM57AQ8TBR7 257 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 C5orf30Q96GV9 206 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 LINC00479Q96M42 142 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 MAP1LC3AQ9H492 121 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 CEP192Q8TEP8 1941 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 F2Z2F3 143 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 YPEL3P61236 119 aaPredicted RBP9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 CST9LQ9H4G1 147 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 TMEM160Q9NX00 188 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 HECTD1Q9ULT8 2610 aa9.52□□□□□ -0.89
DNMT3B-201ENST00000201963 A0A1B0GWB2 263 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 AREGP15514 252 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 MORN2Q502X0 79 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 C9orf106Q8NAJ2 232 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 OR4C13Q8NGP0 309 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 TIMD4Q96H15 378 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 MRPS16Q9Y3D3 137 aaKnown RBP9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 LHFPL4Q7Z7J7 247 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 PYGO2Q9BRQ0 406 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 ZNF257Q9Y2Q1 563 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 TMEM131Q92545 1883 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 ITGB1BP1O14713 200 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 RPL13AP40429 203 aaKnown RBP9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 CACNG7P62955 275 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 OCIAD2Q56VL3 154 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 NHP2Q9NX24 153 aaKnown RBP9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 SH2D7A6NKC9 451 aaPredicted RBP9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 ATP5IP56385 69 aaPredicted RBP9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 SPRR3Q9UBC9 169 aa9.51□□□□□ -0.89
DNMT3B-201ENST00000201963 GGNQ86UU5 652 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 NUP35Q8NFH5 326 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 EPDR1Q9UM22 224 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 FOXI3A8MTJ6 420 aaPredicted RBP9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 J3QW42 95 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 MYOD1P15172 320 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 FAM53AQ6NSI3 398 aaPredicted RBP9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 ZNF292O60281 2723 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 SAA2-SAA4A0A096LPE2 208 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 H7C2G1 150 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 SAA2P0DJI9 122 aaPredicted RBP9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 SEC11AP67812 179 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 CACNG8Q8WXS5 425 aa9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 SOX21Q9Y651 276 aaPredicted RBP9.5□□□□□ -0.89
DNMT3B-201ENST00000201963 CFAP54Q96N23 3096 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 CECR9P0C854 216 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 CD69Q07108 199 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 RPRMLQ8N4K4 120 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 OR10W1Q8NGF6 305 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 C18orf32Q8TCD1 76 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 ARFGEF3Q5TH69 2177 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 PPIAL4EA0A075B759 164 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 IGHV3-35A0A0C4DH35 117 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 MGPP08493 103 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 PPIAL4FP0DN26 164 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 IGLL1P15814 213 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 MC5RP33032 325 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 FAM216BQ8N7L0 139 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 Q9H3A6 140 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 MRPL27Q9P0M9 148 aaKnown RBP9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 ABCA12Q86UK0 2595 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 FREM1Q5H8C1 2179 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 IGKV3-7A0A075B6H7 116 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 TRBV6-6A0A0A6YYG2 114 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 CGB1A6NKQ9 187 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 SAA1P0DJI8 122 aaPredicted RBP9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 BMI1P35226 326 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 Q6P435 159 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 SFTA2Q6UW10 78 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 WDR82Q6UXN9 313 aa9.49□□□□□ -0.89
DNMT3B-201ENST00000201963 MTORP42345 2549 aa9.48□□□□□ -0.89
DNMT3B-201ENST00000201963 YPEL1O60688 119 aa9.48□□□□□ -0.89
DNMT3B-201ENST00000201963 TTC9CQ8N5M4 171 aa9.48□□□□□ -0.89
DNMT3B-201ENST00000201963 YPEL2Q96QA6 119 aa9.48□□□□□ -0.89
DNMT3B-201ENST00000201963 UPK2O00526 184 aa9.48□□□□□ -0.89
DNMT3B-201ENST00000201963 CEACAM8P31997 349 aaPredicted RBP9.48□□□□□ -0.89
DNMT3B-201ENST00000201963 HERVK_113P61574 105 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms