RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 PSG1P11464 419 aa11.46□□□□□ -0.57
ERCC1-201ENST00000013807 HLA-DMBP28068 263 aa11.46□□□□□ -0.57
ERCC1-201ENST00000013807 TMBIM6P55061 237 aa11.46□□□□□ -0.57
ERCC1-201ENST00000013807 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
ERCC1-201ENST00000013807 IL18Q14116 193 aa11.46□□□□□ -0.57
ERCC1-201ENST00000013807 PSMG4Q5JS54 123 aa11.46□□□□□ -0.57
ERCC1-201ENST00000013807 DNAH6Q9C0G6 4158 aa11.46□□□□□ -0.58
ERCC1-201ENST00000013807 TRAV10A0A0B4J240 114 aa11.45□□□□□ -0.58
ERCC1-201ENST00000013807 PIGBOS1A0A0B4J2F0 54 aa11.45□□□□□ -0.58
ERCC1-201ENST00000013807 IGLL5B9A064 214 aa11.45□□□□□ -0.58
ERCC1-201ENST00000013807 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
ERCC1-201ENST00000013807 NUP62P37198 522 aaPredicted RBP11.45□□□□□ -0.58
ERCC1-201ENST00000013807 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
ERCC1-201ENST00000013807 SMCO1Q147U7 214 aa11.45□□□□□ -0.58
ERCC1-201ENST00000013807 SIGLEC15Q6ZMC9 328 aa11.45□□□□□ -0.58
ERCC1-201ENST00000013807 OR51G1Q8NGK1 321 aa11.45□□□□□ -0.58
ERCC1-201ENST00000013807 CLUHP3Q96NS8 147 aa11.45□□□□□ -0.58
ERCC1-201ENST00000013807 NEU1Q99519 415 aa11.45□□□□□ -0.58
ERCC1-201ENST00000013807 RSL24D1Q9UHA3 163 aaKnown RBP11.45□□□□□ -0.58
ERCC1-201ENST00000013807 IFNA10P01566 189 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 NKX2-1P43699 371 aaPredicted RBP11.44□□□□□ -0.58
ERCC1-201ENST00000013807 KLF9Q13886 244 aaPredicted RBP11.44□□□□□ -0.58
ERCC1-201ENST00000013807 OR8G2PQ6IF36 304 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 Q6ZTC4 211 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 LYZL2Q7Z4W2 148 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 LGI3Q8N145 548 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 DTD1Q8TEA8 209 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 RNF125Q96EQ8 232 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 ACY3Q96HD9 319 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 RNF126Q9BV68 326 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 SLIRPQ9GZT3 109 aaKnown RBP11.44□□□□□ -0.58
ERCC1-201ENST00000013807 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
ERCC1-201ENST00000013807 IGKV1D-37A0A075B6S9 117 aa11.43□□□□□ -0.58
ERCC1-201ENST00000013807 PITX3O75364 302 aa11.43□□□□□ -0.58
ERCC1-201ENST00000013807 SRPXP78539 464 aa11.43□□□□□ -0.58
ERCC1-201ENST00000013807 C1orf194Q5T5A4 169 aa11.43□□□□□ -0.58
ERCC1-201ENST00000013807 ZNF705AQ6ZN79 300 aaPredicted RBP11.43□□□□□ -0.58
ERCC1-201ENST00000013807 RBKSQ9H477 322 aa11.43□□□□□ -0.58
ERCC1-201ENST00000013807 CLEC5AQ9NY25 188 aa11.43□□□□□ -0.58
ERCC1-201ENST00000013807 PFDN2Q9UHV9 154 aa11.43□□□□□ -0.58
ERCC1-201ENST00000013807 DUXBA0A1W2PPF3 345 aa11.42□□□□□ -0.58
ERCC1-201ENST00000013807 ANXA3P12429 323 aa11.42□□□□□ -0.58
ERCC1-201ENST00000013807 GAMTQ14353 236 aa11.42□□□□□ -0.58
ERCC1-201ENST00000013807 C12orf74Q32Q52 190 aa11.42□□□□□ -0.58
ERCC1-201ENST00000013807 PRR13Q9NZ81 148 aa11.42□□□□□ -0.58
ERCC1-201ENST00000013807 HECTD4Q9Y4D8 3996 aa11.42□□□□□ -0.58
ERCC1-201ENST00000013807 IGHV4-4A0A075B6R2 117 aa11.41□□□□□ -0.58
ERCC1-201ENST00000013807 SMIM9A6NGZ8 99 aa11.41□□□□□ -0.58
ERCC1-201ENST00000013807 ZNF705FA8MVS1 300 aaPredicted RBP11.41□□□□□ -0.58
ERCC1-201ENST00000013807 AMBPP02760 352 aa11.41□□□□□ -0.58
ERCC1-201ENST00000013807 ZNF705DP0CH99 300 aaPredicted RBP11.41□□□□□ -0.58
ERCC1-201ENST00000013807 ZNF705BP0CI00 300 aaPredicted RBP11.41□□□□□ -0.58
ERCC1-201ENST00000013807 SLC25A6P12236 298 aa11.41□□□□□ -0.58
ERCC1-201ENST00000013807 AKR1C4P17516 323 aa11.41□□□□□ -0.58
ERCC1-201ENST00000013807 TNFSF8P32971 234 aa11.41□□□□□ -0.58
ERCC1-201ENST00000013807 CENPSQ8N2Z9 138 aa11.41□□□□□ -0.58
ERCC1-201ENST00000013807 LRTM2Q8N967 370 aa11.41□□□□□ -0.58
ERCC1-201ENST00000013807 FABP12A6NFH5 140 aa11.4□□□□□ -0.58
ERCC1-201ENST00000013807 SOCS3O14543 225 aa11.4□□□□□ -0.58
ERCC1-201ENST00000013807 TMEM128Q5BJH2 165 aa11.4□□□□□ -0.58
ERCC1-201ENST00000013807 DEDD2Q8WXF8 326 aa11.4□□□□□ -0.58
ERCC1-201ENST00000013807 SAV1Q9H4B6 383 aaPredicted RBP11.4□□□□□ -0.58
ERCC1-201ENST00000013807 XCL2Q9UBD3 114 aa11.4□□□□□ -0.58
ERCC1-201ENST00000013807 CELA1Q9UNI1 258 aa11.4□□□□□ -0.58
ERCC1-201ENST00000013807 ZFP92A6NM28 416 aa11.39□□□□□ -0.59
ERCC1-201ENST00000013807 FABP1P07148 127 aa11.39□□□□□ -0.59
ERCC1-201ENST00000013807 PSMB3P49720 205 aa11.39□□□□□ -0.59
ERCC1-201ENST00000013807 ZNF90Q03938 601 aa11.39□□□□□ -0.59
ERCC1-201ENST00000013807 SPATA31B1PQ5VZV4 182 aa11.39□□□□□ -0.59
ERCC1-201ENST00000013807 TRGV9Q99603 122 aa11.39□□□□□ -0.59
ERCC1-201ENST00000013807 WDR12Q9GZL7 423 aaKnown RBP11.39□□□□□ -0.59
ERCC1-201ENST00000013807 MCUBQ9NWR8 336 aa11.39□□□□□ -0.59
ERCC1-201ENST00000013807 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 SNRPGP15A8MWD9 76 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 CFDP00746 253 aaPredicted RBP11.38□□□□□ -0.59
ERCC1-201ENST00000013807 FAUP35544 74 aaKnown RBP11.38□□□□□ -0.59
ERCC1-201ENST00000013807 PAX9P55771 341 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 GDF5OSQ5U4N7 250 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 SAMD13Q5VXD3 122 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 FOXI2Q6ZQN5 318 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 THAP8Q8NA92 274 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 OR1S1Q8NH92 325 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 TRIM63Q969Q1 353 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 SLC35E1Q96K37 410 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 SLC45A2Q9UMX9 530 aa11.38□□□□□ -0.59
ERCC1-201ENST00000013807 IGKV1OR2-108A0A075B7D4 117 aa11.37□□□□□ -0.59
ERCC1-201ENST00000013807 PRSS46E5RG02 174 aa11.37□□□□□ -0.59
ERCC1-201ENST00000013807 H3BMQ9 156 aa11.37□□□□□ -0.59
ERCC1-201ENST00000013807 ISLRO14498 428 aa11.37□□□□□ -0.59
ERCC1-201ENST00000013807 ID1P41134 155 aa11.37□□□□□ -0.59
ERCC1-201ENST00000013807 RAB11AP62491 216 aa11.37□□□□□ -0.59
ERCC1-201ENST00000013807 ZNF79Q15937 498 aa11.37□□□□□ -0.59
ERCC1-201ENST00000013807 ZNF709Q8N972 641 aa11.37□□□□□ -0.59
ERCC1-201ENST00000013807 SLC25A21Q9BQT8 299 aaPredicted RBP11.37□□□□□ -0.59
ERCC1-201ENST00000013807 A8MTW9 85 aa11.36□□□□□ -0.59
ERCC1-201ENST00000013807 SPART-AS1P0CW21 52 aa11.36□□□□□ -0.59
ERCC1-201ENST00000013807 AP3S2P59780 193 aa11.36□□□□□ -0.59
ERCC1-201ENST00000013807 LINC00336Q6ZUF6 198 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms