RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 GAR1Q9NY12 217 aaKnown RBP13.53□□□□□ -0.24
PHGDH-230ENST00000641927 WDR83OSQ9Y284 106 aa13.53□□□□□ -0.24
PHGDH-230ENST00000641927 IGKV1OR2-108A0A075B7D4 117 aa13.53□□□□□ -0.24
PHGDH-230ENST00000641927 A0A1W2PRX2 142 aa13.53□□□□□ -0.24
PHGDH-230ENST00000641927 NUDT19A8MXV4 375 aa13.53□□□□□ -0.24
PHGDH-230ENST00000641927 F8W735 103 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-230ENST00000641927 SCGB2A1O75556 95 aa13.53□□□□□ -0.24
PHGDH-230ENST00000641927 ZNF343Q6P1L6 599 aa13.53□□□□□ -0.24
PHGDH-230ENST00000641927 HSD17B11Q8NBQ5 300 aa13.53□□□□□ -0.24
PHGDH-230ENST00000641927 WDR61Q9GZS3 305 aaKnown RBP13.53□□□□□ -0.24
PHGDH-230ENST00000641927 CYTL1Q9NRR1 136 aa13.53□□□□□ -0.24
PHGDH-230ENST00000641927 PPP5D1E7EU14 171 aa13.52□□□□□ -0.25
PHGDH-230ENST00000641927 NUPL2O15504 423 aaKnown RBP13.52□□□□□ -0.25
PHGDH-230ENST00000641927 CDX1P47902 265 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-230ENST00000641927 RAB31Q13636 194 aa13.52□□□□□ -0.25
PHGDH-230ENST00000641927 KLHL30-AS1Q8NEE0 82 aa13.52□□□□□ -0.25
PHGDH-230ENST00000641927 WFDC12Q8WWY7 111 aa13.52□□□□□ -0.25
PHGDH-230ENST00000641927 TMEM158Q8WZ71 300 aa13.52□□□□□ -0.25
PHGDH-230ENST00000641927 TRAV30A0A087WSZ9 112 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.51□□□□□ -0.25
PHGDH-230ENST00000641927 TRBV12-3P01733 135 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 LGALS1P09382 135 aaKnown RBP13.51□□□□□ -0.25
PHGDH-230ENST00000641927 FCGR2BP31994 310 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-230ENST00000641927 ARL3P36405 182 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 CAMLGP49069 296 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 KRTAP10-3P60369 221 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 RUNX1Q01196 453 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 TIGITQ495A1 244 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 C18orf65Q6ZTR6 163 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 ZNF709Q8N972 641 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 THAP8Q8NA92 274 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 MGST2Q99735 147 aa13.51□□□□□ -0.25
PHGDH-230ENST00000641927 LSM4Q9Y4Z0 139 aaKnown RBP13.51□□□□□ -0.25
PHGDH-230ENST00000641927 TSSC4Q9Y5U2 329 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-230ENST00000641927 AGPAT2O15120 278 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 TGOLN2O43493 480 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 MPDU1O75352 247 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 CTSGP08311 255 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 IGLC1P0CG04 106 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 ZNF90Q03938 601 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 CHRDL1Q9BU40 450 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 PEF1Q9UBV8 284 aaKnown RBP13.5□□□□□ -0.25
PHGDH-230ENST00000641927 ATRQ13535 2644 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 IGKV1D-37A0A075B6S9 117 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 IGHV3-35A0A0C4DH35 117 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 SLC51BQ86UW2 128 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 C4orf3Q8WVX3 66 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 ATP6V0BQ99437 205 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 RSG1Q9BU20 258 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 NPCDR1Q9BY65 106 aa13.5□□□□□ -0.25
PHGDH-230ENST00000641927 IGKV1-17P01599 117 aa13.49□□□□□ -0.25
PHGDH-230ENST00000641927 TPT1P13693 172 aaKnown RBP13.49□□□□□ -0.25
PHGDH-230ENST00000641927 EIF5AP63241 154 aaKnown RBP13.49□□□□□ -0.25
PHGDH-230ENST00000641927 IFITM2Q01629 132 aa13.49□□□□□ -0.25
PHGDH-230ENST00000641927 DEFB136Q30KP8 78 aa13.49□□□□□ -0.25
PHGDH-230ENST00000641927 FAM209BQ5JX69 171 aa13.49□□□□□ -0.25
PHGDH-230ENST00000641927 SPSB3Q6PJ21 355 aa13.49□□□□□ -0.25
PHGDH-230ENST00000641927 TRGV9Q99603 122 aa13.49□□□□□ -0.25
PHGDH-230ENST00000641927 PARD6GQ9BYG4 376 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-230ENST00000641927 FBN1P35555 2871 aaKnown RBP13.49□□□□□ -0.25
PHGDH-230ENST00000641927 C17orf112F2Z3M2 114 aa13.48□□□□□ -0.25
PHGDH-230ENST00000641927 FABP1P07148 127 aa13.48□□□□□ -0.25
PHGDH-230ENST00000641927 GATA2P23769 480 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-230ENST00000641927 ATP6V0CP27449 155 aa13.48□□□□□ -0.25
PHGDH-230ENST00000641927 ADMP35318 185 aa13.48□□□□□ -0.25
PHGDH-230ENST00000641927 NSUN5P1Q3KNT7 163 aa13.48□□□□□ -0.25
PHGDH-230ENST00000641927 CYP2G1PQ6ZSU1 146 aa13.48□□□□□ -0.25
PHGDH-230ENST00000641927 C8orf86Q6ZUL3 223 aa13.48□□□□□ -0.25
PHGDH-230ENST00000641927 GGTLC1Q9BX51 225 aa13.48□□□□□ -0.25
PHGDH-230ENST00000641927 I3L521 148 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 RD3LP0DJH9 198 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 ZNF616Q08AN1 781 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 BPIFCQ8NFQ6 507 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 SH3BGRL3Q9H299 93 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 RFNGQ9Y644 331 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 BMPR1BO00238 502 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 GGCTO75223 188 aaKnown RBP13.47□□□□□ -0.25
PHGDH-230ENST00000641927 YIF1AO95070 293 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 OR2C1O95371 312 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-230ENST00000641927 MIC13Q5XKP0 118 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 BAP18Q8IXM2 172 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 STOML3Q8TAV4 291 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 ST8SIA2Q92186 375 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 GNPNAT1Q96EK6 184 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-230ENST00000641927 FAM210AQ96ND0 272 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 GINS3Q9BRX5 216 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 SLC25A32Q9H2D1 315 aa13.47□□□□□ -0.25
PHGDH-230ENST00000641927 IGHV4OR15-8A0A075B7B6 117 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 A0A087WW49 117 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 RGS13O14921 159 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 HSPB1P04792 205 aaKnown RBP13.46□□□□□ -0.26
PHGDH-230ENST00000641927 PSG1P11464 419 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 YPEL3P61236 119 aaPredicted RBP13.46□□□□□ -0.26
PHGDH-230ENST00000641927 SELENOTP62341 195 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 TMEM182Q6ZP80 229 aaPredicted RBP13.46□□□□□ -0.26
PHGDH-230ENST00000641927 STPG3Q8N7X2 389 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 OR11H1Q8NG94 326 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 Q8WTZ3 238 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 DPF1Q92782 380 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms