RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 ZNF501Q96CX3 271 aaPredicted RBP6.93□□□□□ -1.3
NECAP1-227ENST00000640648 LTBP1Q14766 1721 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 PRR32B1ATL7 298 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 SCTP09683 121 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 SPATA31B1PQ5VZV4 182 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 MPDZO75970 2070 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 DOCK4Q8N1I0 1966 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 NAPSAO96009 420 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 CEACAM21Q3KPI0 293 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 TMEM14EPQ6UXP3 125 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 TEN1Q86WV5 123 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 ABHD14AQ9BUJ0 271 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 MRPL20Q9BYC9 149 aaKnown RBP6.92□□□□□ -1.3
NECAP1-227ENST00000640648 RALGAPA1Q6GYQ0 2036 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 H0YJW9 148 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 LIFP15018 202 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 Q6Q795 121 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 NUP37Q8NFH4 326 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 C11orf52Q96A22 123 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 ZNF492Q9P255 531 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 INSIG2Q9Y5U4 225 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 RALGAPA2Q2PPJ7 1873 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 IGKV1D-43A0A0B4J1Z2 117 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 IGHV5-10-1A0A0J9YXX1 117 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 J3QW42 95 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 LINC00271P0C7V0 271 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 MAGEA5P43359 124 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 CACNG7P62955 275 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 NMSQ5H8A3 153 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 TMEM170BQ5T4T1 132 aa6.92□□□□□ -1.3
NECAP1-227ENST00000640648 A0A0G2JMZ2 1700 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 LRRC37A2A6NM11 1700 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 LOC389332A0A1B0GUA5 103 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 hDV102S1A0JD36 115 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 PGPA6NDG6 321 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 PSG4Q00888 419 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 RNPS1Q15287 305 aaKnown RBP6.91□□□□□ -1.3
NECAP1-227ENST00000640648 DEFB109BQ30KR1 87 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.91□□□□□ -1.3
NECAP1-227ENST00000640648 ZDHHC16Q969W1 377 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 FOXC2Q99958 501 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 C1orf43Q9BWL3 253 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 MTCL1Q9Y4B5 1905 aaKnown RBP6.91□□□□□ -1.3
NECAP1-227ENST00000640648 ZNF818PQ6ZRF7 136 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 NEGR1Q7Z3B1 354 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 C1QL2Q7Z5L3 287 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 CEND1Q8N111 149 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 GCSAMQ8N6F7 178 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 YPEL4Q96NS1 127 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 FAM27BQ5VT28 67 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 C2orf82Q6UX34 121 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 AMN1Q8IY45 258 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 ABHD17AQ96GS6 310 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 DNAJC30Q96LL9 226 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 C20orf173Q96LM9 149 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 GPR179Q6PRD1 2367 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 FABP5P3A8MUU1 101 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 PATE3B3GLJ2 98 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 FOXI1Q12951 378 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 NRN1LQ496H8 165 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 SLC25A47Q6Q0C1 308 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 SHISA5Q8N114 240 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 SRSF12Q8WXF0 261 aaKnown RBP6.91□□□□□ -1.3
NECAP1-227ENST00000640648 DUX5Q96PT3 197 aa6.91□□□□□ -1.3
NECAP1-227ENST00000640648 SBF1O95248 1867 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 GOLGB1Q14789 3259 aaKnown RBP6.9□□□□□ -1.3
NECAP1-227ENST00000640648 RPL8P62917 257 aaKnown RBP6.9□□□□□ -1.3
NECAP1-227ENST00000640648 RRN3P1Q2M238 152 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 TNFRSF18Q9Y5U5 241 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 SAP30O75446 220 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 SRD5A1P18405 259 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 PRDX2P32119 198 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 LCN12Q6JVE5 192 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 VKORC1L1Q8N0U8 176 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 RPP25LQ8N5L8 163 aaKnown RBP6.9□□□□□ -1.3
NECAP1-227ENST00000640648 ZIC4Q8N9L1 334 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 DENND4AQ7Z401 1863 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 SCN8AQ9UQD0 1980 aa6.9□□□□□ -1.3
NECAP1-227ENST00000640648 F2Z2F3 143 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 HLA-DRB4P13762 266 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 FOXA3P55318 350 aaPredicted RBP6.9□□□□□ -1.31
NECAP1-227ENST00000640648 HLA-DRB4X5D2U9 266 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 SMIM27A0A1W2PRY6 76 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 CDX4O14627 284 aaPredicted RBP6.9□□□□□ -1.31
NECAP1-227ENST00000640648 MOSP00540 346 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 PRSS57Q6UWY2 283 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 CT55Q8WUE5 264 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 COQ2Q96H96 371 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 CLUHP3Q96NS8 147 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 IMUPQ9GZP8 106 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 SCRT2Q9NQ03 307 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 OTORQ9NRC9 128 aa6.9□□□□□ -1.31
NECAP1-227ENST00000640648 DOPEY2Q9Y3R5 2298 aa6.89□□□□□ -1.31
NECAP1-227ENST00000640648 CACNA1HO95180 2353 aa6.89□□□□□ -1.31
NECAP1-227ENST00000640648 NPYP01303 97 aa6.89□□□□□ -1.31
NECAP1-227ENST00000640648 SPAG8Q99932 426 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-227ENST00000640648 WNK2Q9Y3S1 2297 aa6.89□□□□□ -1.31
NECAP1-227ENST00000640648 UQCRQO14949 82 aa6.89□□□□□ -1.31
NECAP1-227ENST00000640648 HLA-DMBP28068 263 aa6.89□□□□□ -1.31
NECAP1-227ENST00000640648 SLC25A39Q9BZJ4 359 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms