RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CLEC5AQ9NY25 188 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 IGKV1D-37A0A075B6S9 117 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 TRAV9-2A0A087WT02 112 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 IGHV2-26A0A0B4J1V2 119 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 C20orf202A1L168 122 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 SH2D7A6NKC9 451 aaPredicted RBP8.82□□□□□ -1
SNIP1-204ENST00000638725 CGB1A6NKQ9 187 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 H0YJW9 148 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 OR2J3O76001 311 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 APOA2P02652 100 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 CD24P25063 80 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 ZNF474Q6S9Z5 364 aaPredicted RBP8.82□□□□□ -1
SNIP1-204ENST00000638725 ZNF833PQ6ZTB9 187 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 URB1-AS1Q96HZ7 61 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 LINC00574Q9H8X3 128 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 TP73-AS1Q9UF72 201 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 RPH3ALQ9UNE2 315 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 TRAV17A0A0B4J275 112 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 TCRBV4S1A1TA0A5B7 111 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 FSTL3O95633 263 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 CCL3L1P16619 93 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 PTTG1IPP53801 180 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 TCF24Q7RTU0 167 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 RPRMLQ8N4K4 120 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 OR2D3Q8NGH3 330 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 OR1L4Q8NGR5 311 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 BLNKQ8WV28 456 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 GUCD1Q96NT3 240 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 MRPS16Q9Y3D3 137 aaKnown RBP8.81□□□□□ -1
SNIP1-204ENST00000638725 M0QZ24 198 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 TM4SF5O14894 197 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 SLC25A5P05141 298 aaKnown RBP8.81□□□□□ -1
SNIP1-204ENST00000638725 SP9P0CG40 484 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 HIST1H1EP10412 219 aaKnown RBP8.81□□□□□ -1
SNIP1-204ENST00000638725 BPIFB3P59826 476 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 DIAPH2-AS1Q14236 149 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 TIMM23BQ5SRD1 257 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 LINC00305Q7Z4B0 112 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 ORAOV1Q8WV07 137 aa8.81□□□□□ -1
SNIP1-204ENST00000638725 A0A1B0GXF2 115 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 hADV38S2A0JD32 116 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 MOSP00540 346 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 PLA2G2CQ5R387 149 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 RUSC1-AS1Q66K80 236 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 RBMXL3Q8N7X1 1067 aaKnown RBP8.8□□□□□ -1
SNIP1-204ENST00000638725 FLYWCH2Q96CP2 140 aaKnown RBP8.8□□□□□ -1
SNIP1-204ENST00000638725 NAV3Q8IVL0 2385 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 MYCNOSP40205 109 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 PCP4P48539 62 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 FOXA3P55318 350 aaPredicted RBP8.8□□□□□ -1
SNIP1-204ENST00000638725 LINC00322Q6ZN03 302 aaPredicted RBP8.8□□□□□ -1
SNIP1-204ENST00000638725 OR4F17Q8NGA8 305 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 ST6GALNAC6Q969X2 333 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 EPDR1Q9UM22 224 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 LINC00312Q9Y6C7 94 aa8.8□□□□□ -1
SNIP1-204ENST00000638725 PGPA6NDG6 321 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 MBD3L4A6NDZ8 208 aaPredicted RBP8.79□□□□□ -1
SNIP1-204ENST00000638725 MBD3L3A6NE82 208 aaPredicted RBP8.79□□□□□ -1
SNIP1-204ENST00000638725 MBD3L5A6NJ08 208 aaPredicted RBP8.79□□□□□ -1
SNIP1-204ENST00000638725 ORM2P19652 201 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 TMEM177Q53S58 311 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 IGFL2Q6UWQ7 119 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 C22orf34Q6ZV56 151 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 PDPNQ86YL7 162 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 OR5AN1Q8NGI8 311 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 MBD3L2Q8NHZ7 208 aaPredicted RBP8.79□□□□□ -1
SNIP1-204ENST00000638725 CHRDL1Q9BU40 450 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 COX11Q9Y6N1 276 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 DYSFO75923 2080 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 FAM120AOSQ5T036 256 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 LINC00173Q6ZV60 143 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 SSX8Q7RTT4 187 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 TMEM167AQ8TBQ9 72 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 ZNF596Q8TC21 504 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 RNASE8Q8TDE3 154 aaKnown RBP8.79□□□□□ -1
SNIP1-204ENST00000638725 CFAP47Q6ZTR5 3102 aa8.79□□□□□ -1
SNIP1-204ENST00000638725 IGLC7A0M8Q6 106 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 H3BTX0 84 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 HBBP68871 147 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 CCL8P80075 99 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 TMEM30BQ3MIR4 351 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 ATP5L2Q7Z4Y8 100 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 THAP8Q8NA92 274 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 TMEM70Q9BUB7 260 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 ASCL3Q9NQ33 180 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 TPSG1Q9NRR2 321 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 PLCE1Q9P212 2302 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 C22orf46C9J442 243 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 INS-IGF2F8WCM5 200 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 FCN3O75636 299 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 TOMM40O96008 361 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 ZNF738Q8NE65 137 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 OR1B1Q8NGR6 318 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 GAL3ST2Q9H3Q3 398 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 RPP21Q9H633 154 aaKnown RBP8.78□□□□□ -1
SNIP1-204ENST00000638725 OR4C46A6NHA9 309 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 TEX36Q5VZQ5 186 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 ZCCHC24Q8N2G6 241 aaKnown RBP8.78□□□□□ -1
SNIP1-204ENST00000638725 MUC15Q8N387 334 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 OR4C13Q8NGP0 309 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms