RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 IGHV2-26A0A0B4J1V2 119 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 NUDT3O95989 172 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 TRBV20OR9-2A0A075B6H5 130 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 A0A1B0GUT8 65 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 UQCRFS1P47985 274 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 SEPSECSQ9HD40 501 aaKnown RBP11.81□□□□□ -0.52
SCARB2-208ENST00000638372 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-208ENST00000638372 FBLL1A6NHQ2 334 aaKnown RBP11.81□□□□□ -0.52
SCARB2-208ENST00000638372 CA1P00915 261 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-208ENST00000638372 CFPP27918 469 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 PSMB2P49721 201 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 TAS2R60P59551 318 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 KLRD1Q13241 179 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 COL5A1-AS1Q5SY13 56 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 ZNRD1Q9P1U0 126 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 C9JCJ5 164 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 KLF17Q5JT82 389 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-208ENST00000638372 LIME1Q9H400 295 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 DCAF16Q9NXF7 216 aa11.81□□□□□ -0.52
SCARB2-208ENST00000638372 NCOA6Q14686 2063 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-208ENST00000638372 M0R3E3 92 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 FAM159AQ6UWV7 190 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 LYPD2Q6UXB3 125 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 OR1N2Q8NGR9 330 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 SSBP4Q9BWG4 385 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-208ENST00000638372 TBL2Q9Y4P3 447 aaKnown RBP11.8□□□□□ -0.52
SCARB2-208ENST00000638372 LOC102724200A0A096LPH7 203 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-208ENST00000638372 RHOGP84095 191 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 GAFA1Q96PS6 74 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 RPP21Q9H633 154 aaKnown RBP11.8□□□□□ -0.52
SCARB2-208ENST00000638372 A0A1W2PRE2 83 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 A6NDN8 102 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 IGKV1-16P04430 117 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 ZNF585BQ52M93 769 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 DERL1Q9BUN8 251 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 CRIM1Q9NZV1 1036 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 UQCR10Q9UDW1 63 aa11.8□□□□□ -0.52
SCARB2-208ENST00000638372 HOXA5P20719 270 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 RPL13AP40429 203 aaKnown RBP11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST1H2BKO60814 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST1H2BJP06899 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST1H2BOP23527 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST1H2BBP33778 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST1H2BDP58876 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST1H2BCP62807 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST2H2BEQ16778 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-208ENST00000638372 Q6ZS49 121 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 C1QL4Q86Z23 238 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST1H2BHQ93079 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST1H2BNQ99877 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 HIST1H2BMQ99879 126 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 TRAV40A0A0B4J280 105 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 FAM90A9PA6NNJ1 464 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 STAG3L2P0CL84 134 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 STAG3L3P0CL85 134 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 SNRPD3P62318 126 aaKnown RBP11.79□□□□□ -0.52
SCARB2-208ENST00000638372 MLANAQ16655 118 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 EPDR1Q9UM22 224 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 C5orf52A6NGY3 159 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 SRSF4Q08170 494 aaKnown RBP11.79□□□□□ -0.52
SCARB2-208ENST00000638372 PRSS8Q16651 343 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 ZNF257Q9Y2Q1 563 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 DMRT1Q9Y5R6 373 aa11.79□□□□□ -0.52
SCARB2-208ENST00000638372 A0A0G2JLM5 398 aa11.78□□□□□ -0.52
SCARB2-208ENST00000638372 TLN1Q9Y490 2541 aaKnown RBP11.78□□□□□ -0.52
SCARB2-208ENST00000638372 PLA2G2CQ5R387 149 aa11.78□□□□□ -0.52
SCARB2-208ENST00000638372 TEX38Q6PEX7 206 aa11.78□□□□□ -0.52
SCARB2-208ENST00000638372 Q6ZR03 302 aa11.78□□□□□ -0.52
SCARB2-208ENST00000638372 SYT8Q8NBV8 401 aa11.78□□□□□ -0.52
SCARB2-208ENST00000638372 DUX5Q96PT3 197 aa11.78□□□□□ -0.52
SCARB2-208ENST00000638372 MBNL3Q9NUK0 354 aaKnown RBP11.78□□□□□ -0.52
SCARB2-208ENST00000638372 MGST2Q99735 147 aa11.78□□□□□ -0.52
SCARB2-208ENST00000638372 ATG101Q9BSB4 218 aa11.78□□□□□ -0.52
SCARB2-208ENST00000638372 SERF1AO75920 110 aa11.77□□□□□ -0.52
SCARB2-208ENST00000638372 CXCL1P09341 107 aa11.77□□□□□ -0.52
SCARB2-208ENST00000638372 SLC25A34Q6PIV7 304 aa11.77□□□□□ -0.52
SCARB2-208ENST00000638372 COLCA2A8K830 154 aa11.77□□□□□ -0.52
SCARB2-208ENST00000638372 DTX1Q86Y01 620 aa11.77□□□□□ -0.52
SCARB2-208ENST00000638372 FMC1Q96HJ9 113 aa11.77□□□□□ -0.52
SCARB2-208ENST00000638372 AGMATQ9BSE5 352 aa11.77□□□□□ -0.52
SCARB2-208ENST00000638372 IGHV1-3A0A0C4DH29 117 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 C7orf71A4D174 169 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 WNT2P09544 360 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 COL8A2P25067 703 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 ZNF56Q15929 161 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 TMEM219Q86XT9 240 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 TNFRSF14Q92956 283 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 PRELID3AQ96N28 172 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 C15orf62A8K5M9 175 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.53
SCARB2-208ENST00000638372 APOHP02749 345 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-208ENST00000638372 GLMPQ8WWB7 406 aa11.76□□□□□ -0.53
SCARB2-208ENST00000638372 C14orf144Q96I85 54 aa11.76□□□□□ -0.53
SCARB2-208ENST00000638372 ZNF324O75467 553 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-208ENST00000638372 TMEM50AO95807 157 aa11.76□□□□□ -0.53
SCARB2-208ENST00000638372 SLC25A48Q6ZT89 311 aaKnown RBP11.76□□□□□ -0.53
SCARB2-208ENST00000638372 WDR86Q86TI4 376 aa11.76□□□□□ -0.53
SCARB2-208ENST00000638372 CIARTQ8N365 385 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms