RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 GLYATL3Q5SZD4 288 aa-1.77□□□□□ -2.69
SCN1A-215ENST00000637285 HIST3H2BBQ8N257 126 aa-1.77□□□□□ -2.69
SCN1A-215ENST00000637285 OR8D4Q8NGM9 314 aa-1.77□□□□□ -2.69
SCN1A-215ENST00000637285 SLC37A2Q8TED4 501 aa-1.77□□□□□ -2.69
SCN1A-215ENST00000637285 HIST1H2BHQ93079 126 aa-1.77□□□□□ -2.69
SCN1A-215ENST00000637285 GPER1Q99527 375 aa-1.77□□□□□ -2.69
SCN1A-215ENST00000637285 HIST1H2BNQ99877 126 aa-1.77□□□□□ -2.69
SCN1A-215ENST00000637285 HIST1H2BMQ99879 126 aa-1.77□□□□□ -2.69
SCN1A-215ENST00000637285 TRAV9-1A0A075B6T8 112 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 TRAV10A0A0B4J240 114 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 A0A0J9YY10 115 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 A0A1B0GX78 115 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 GSTTP1A0A1W2PQM5 241 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 SULT1C2O00338 296 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 NEMFO60524 1076 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 LDOC1O95751 146 aaPredicted RBP-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 CCL1P22362 96 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 C1orf194Q5T5A4 169 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 RPL22L1Q6P5R6 122 aaKnown RBP-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 HIST2H3AQ71DI3 136 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 AGR3Q8TD06 166 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 ZNF431Q8TF32 576 aaPredicted RBP-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 PARD6GQ9BYG4 376 aaPredicted RBP-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 UNC13BO14795 1591 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 PTPRFP10586 1907 aa-1.78□□□□□ -2.69
SCN1A-215ENST00000637285 SBF1O95248 1867 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 LRPPRCP42704 1394 aaKnown RBP-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 KIF15Q9NS87 1388 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 TOX3O15405 576 aaPredicted RBP-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 HMMRO75330 724 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 TNFAIP8O95379 198 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 TYMSP04818 313 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 MAP3K7CLP57077 242 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 VAMP3Q15836 100 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 DEFB109BQ30KR1 87 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 FAM78BQ5VT40 261 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 PATE2Q6UY27 113 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 BLIDQ8IZY5 108 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 ARL6IP6Q8N6S5 226 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 TCEAL2Q9H3H9 227 aaPredicted RBP-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 FKBP14Q9NWM8 211 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 EURLQ9NYK6 297 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 PCTPQ9UKL6 214 aa-1.79□□□□□ -2.7
SCN1A-215ENST00000637285 GADD45GO95257 159 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 DDTP30046 118 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 CAV1Q03135 178 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 C4orf22Q6V702 233 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 SLC30A7Q8NEW0 376 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 Q8TAT8 98 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 CANT1Q8WVQ1 401 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 SLC39A9Q9NUM3 307 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 IDI2-AS1Q9NZ38 188 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 TP73-AS1Q9UF72 201 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 ENPP5Q9UJA9 477 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 RYR1P21817 5038 aa-1.8□□□□□ -2.7
SCN1A-215ENST00000637285 DOCK4Q8N1I0 1966 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 USH2AO75445 5202 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 VWFP04275 2813 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 STX10O60499 249 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 STAG3L2P0CL84 134 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 CXCL8P10145 99 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 SPAG11BQ08648 103 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 EIF3IQ13347 325 aaKnown RBP-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 GRK1Q15835 563 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 GUK1Q16774 197 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 HLA-DRB5Q30154 266 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 DNAL1Q4LDG9 190 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 Q8IYB0 196 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 NAT14Q8WUY8 206 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 EEF1AKMT1Q8WVE0 214 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 H1FXQ92522 213 aaKnown RBP-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 WDR61Q9GZS3 305 aaKnown RBP-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 BCL2L10Q9HD36 194 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 OSTCQ9NRP0 149 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 ERGIC3Q9Y282 383 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 LAMC3Q9Y6N6 1575 aa-1.81□□□□□ -2.7
SCN1A-215ENST00000637285 ERBINQ96RT1 1412 aa-1.82□□□□□ -2.7
SCN1A-215ENST00000637285 SPTBN2O15020 2390 aa-1.82□□□□□ -2.7
SCN1A-215ENST00000637285 RAB19A4D1S5 217 aa-1.82□□□□□ -2.7
SCN1A-215ENST00000637285 ERC2-IT1O76042 136 aa-1.82□□□□□ -2.7
SCN1A-215ENST00000637285 ZNF56Q15929 161 aa-1.82□□□□□ -2.7
SCN1A-215ENST00000637285 RIBC1Q8N443 379 aaPredicted RBP-1.82□□□□□ -2.7
SCN1A-215ENST00000637285 WFDC5Q8TCV5 224 aa-1.82□□□□□ -2.7
SCN1A-215ENST00000637285 ZNF75CPQ92670 426 aaPredicted RBP-1.82□□□□□ -2.7
SCN1A-215ENST00000637285 UBAP1Q9NZ09 502 aa-1.82□□□□□ -2.7
SCN1A-215ENST00000637285 MIA2Q96PC5 1412 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 TGP01266 2768 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 C7orf71A4D174 169 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 DISC1C4P0D8 188 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 CCRL2O00421 344 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 HAND1O96004 215 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 CXCR4P61073 352 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 RBM3P98179 157 aaKnown RBP-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 C10orf111Q8N326 155 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 GDPD1Q8N9F7 314 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 OR5D14Q8NGL3 314 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 JOSD2Q8TAC2 188 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 RNASEH2CQ8TDP1 164 aaKnown RBP-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 RBP7Q96R05 134 aa-1.83□□□□□ -2.7
SCN1A-215ENST00000637285 FAM96AQ9H5X1 160 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms