RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 SPINK4O60575 86 aa12.91□□□□□ -0.34
CHRNA7-221ENST00000636898 GPX1P07203 203 aa12.91□□□□□ -0.34
CHRNA7-221ENST00000636898 SIGLECL1Q8N7X8 197 aa12.91□□□□□ -0.34
CHRNA7-221ENST00000636898 SMIM12Q96EX1 92 aa12.91□□□□□ -0.34
CHRNA7-221ENST00000636898 PERPQ96FX8 193 aa12.91□□□□□ -0.34
CHRNA7-221ENST00000636898 LINC00479Q96M42 142 aa12.91□□□□□ -0.34
CHRNA7-221ENST00000636898 TRGV9Q99603 122 aa12.91□□□□□ -0.34
CHRNA7-221ENST00000636898 TPSG1Q9NRR2 321 aa12.91□□□□□ -0.34
CHRNA7-221ENST00000636898 E7EQL1 145 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 PAX2Q02962 417 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 MRPL52Q86TS9 123 aaKnown RBP12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 C22orf15Q8WYQ4 148 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 TNFRSF19Q9NS68 423 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 AKAP13Q12802 2813 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 MAP1BP46821 2468 aaKnown RBP12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 ROS1P08922 2347 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 IGHV1-69-2A0A0G2JMI3 117 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 BMPR1BO00238 502 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 SLC35B1P78383 322 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 TMEM183BQ1AE95 376 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 MRPL54Q6P161 138 aaKnown RBP12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 DMRTC2Q8IXT2 367 aaPredicted RBP12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 RITA1Q96K30 269 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 KCNS1Q96KK3 526 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 ZNF331Q9NQX6 463 aaPredicted RBP12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 SH3BGRL2Q9UJC5 107 aa12.9□□□□□ -0.34
CHRNA7-221ENST00000636898 ANKRD11Q6UB99 2663 aaPredicted RBP12.9□□□□□ -0.35
CHRNA7-221ENST00000636898 C22orf46C9J442 243 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 CORTO00230 105 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 EREGO14944 169 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 CRYGBP07316 175 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 CD33P20138 364 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 NHLRC2Q8NBF2 726 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 GRAMD2BQ96HH9 432 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 CBLN4Q9NTU7 201 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 ZNF586Q9NXT0 402 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 M0R143 59 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 ENSAO43768 121 aaKnown RBP12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 APCSP02743 223 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 REG1AP05451 166 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 RNF224P0DH78 156 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 RPL27AP46776 148 aaKnown RBP12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 CASP6P55212 293 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 TBR1Q16650 682 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 SNHG12Q9BXW3 62 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 EPDR1Q9UM22 224 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 KLF12Q9Y4X4 402 aa12.89□□□□□ -0.35
CHRNA7-221ENST00000636898 B9A039 149 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 ZNF253O75346 499 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 CA1P00915 261 aaPredicted RBP12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 IGLV1-47P01700 117 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 HIST1H1EP10412 219 aaKnown RBP12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 RAB4AP20338 218 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 SRIP30626 198 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 APOBEC3AP31941 199 aaPredicted RBP12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 CDKN1AP38936 164 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 PRRX1P54821 245 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 NUDT10Q8NFP7 164 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 FAM168AQ92567 244 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 NUDT11Q96G61 164 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 ARFGEF3Q5TH69 2177 aa12.88□□□□□ -0.35
CHRNA7-221ENST00000636898 COMPP49747 757 aaPredicted RBP12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 MFAP2P55001 183 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 NUTF2P61970 127 aaKnown RBP12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 KIAA1644Q3SXP7 199 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 C7orf69Q9H7B7 122 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 RALYQ9UKM9 306 aaKnown RBP12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 TBL2Q9Y4P3 447 aaKnown RBP12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 IGHV2-26A0A0B4J1V2 119 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 A0A1W2PS18 150 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 ORM2P19652 201 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 PLP1P60201 277 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 HCP5Q6MZN7 132 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 OR1B1Q8NGR6 318 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 VN1R17PQ8TDU5 208 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 VAMP8Q9BV40 100 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 MRPL27Q9P0M9 148 aaKnown RBP12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 FBXL7Q9UJT9 491 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 SIGLEC9Q9Y336 463 aa12.87□□□□□ -0.35
CHRNA7-221ENST00000636898 IGHV3-72A0A0B4J1Y9 119 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 TRAV34A0A0B4J273 112 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 HYPMO75409 117 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 MOSP00540 346 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 RBP4P02753 201 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 AMTP48728 403 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 UBE2G1P62253 170 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 TNXAQ16473 311 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 NUP35Q8NFH5 326 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 TSKUQ8WUA8 353 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 RCHY1Q96PM5 261 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 MIEN1Q9BRT3 115 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 SSBP3Q9BWW4 388 aaPredicted RBP12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 NRN1Q9NPD7 142 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 PKDREJQ9NTG1 2253 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 ACACAQ13085 2346 aa12.86□□□□□ -0.35
CHRNA7-221ENST00000636898 ZNF324O75467 553 aaPredicted RBP12.85□□□□□ -0.35
CHRNA7-221ENST00000636898 NBEAP1P0C6P0 100 aa12.85□□□□□ -0.35
CHRNA7-221ENST00000636898 CA7P43166 264 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms