RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CEACAM8P31997 349 aaPredicted RBP11.75□□□□□ -0.53
CLN6-215ENST00000636674 SLAQ13239 276 aa11.75□□□□□ -0.53
CLN6-215ENST00000636674 KLF5Q13887 457 aaPredicted RBP11.75□□□□□ -0.53
CLN6-215ENST00000636674 PATE2Q6UY27 113 aa11.75□□□□□ -0.53
CLN6-215ENST00000636674 RPRMLQ8N4K4 120 aa11.75□□□□□ -0.53
CLN6-215ENST00000636674 FXYD5Q96DB9 178 aa11.75□□□□□ -0.53
CLN6-215ENST00000636674 C7orf69Q9H7B7 122 aa11.75□□□□□ -0.53
CLN6-215ENST00000636674 KMT2BQ9UMN6 2715 aaPredicted RBP11.75□□□□□ -0.53
CLN6-215ENST00000636674 E7EUB6 86 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 OR2J3O76001 311 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 C3orf79P0CE67 100 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 SUB1P53999 127 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLN6-215ENST00000636674 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
CLN6-215ENST00000636674 WT1-ASQ06250 92 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 TBR1Q16650 682 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 FAM168AQ92567 244 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 LPAR2Q9HBW0 351 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 PLCE1Q9P212 2302 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 PYYP10082 97 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 ZNF137PP52743 207 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 SPATA45Q537H7 98 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 PVRIGQ6DKI7 326 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 ATP5L2Q7Z4Y8 100 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 SPACA3Q8IXA5 215 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 TMEM186Q96B77 213 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 UQCR10Q9UDW1 63 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 DMXL2Q8TDJ6 3036 aa11.74□□□□□ -0.53
CLN6-215ENST00000636674 CA1P00915 261 aaPredicted RBP11.73□□□□□ -0.53
CLN6-215ENST00000636674 IGLV2-23P01705 113 aa11.73□□□□□ -0.53
CLN6-215ENST00000636674 NUP35Q8NFH5 326 aa11.73□□□□□ -0.53
CLN6-215ENST00000636674 NUDT10Q8NFP7 164 aa11.73□□□□□ -0.53
CLN6-215ENST00000636674 STXBP6Q8NFX7 210 aa11.73□□□□□ -0.53
CLN6-215ENST00000636674 NUDT11Q96G61 164 aa11.73□□□□□ -0.53
CLN6-215ENST00000636674 LINC00479Q96M42 142 aa11.73□□□□□ -0.53
CLN6-215ENST00000636674 PKD1L2Q7Z442 2459 aa11.73□□□□□ -0.53
CLN6-215ENST00000636674 IGLC2P0DOY2 106 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 IGLC3P0DOY3 106 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 HIST1H1EP10412 219 aaKnown RBP11.72□□□□□ -0.53
CLN6-215ENST00000636674 CASP6P55212 293 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 COL5A1-AS1Q5SY13 56 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 Q6ZS92 163 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 NHLRC2Q8NBF2 726 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 NPIPB3Q92617 1050 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 ST6GALNAC6Q969X2 333 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 SAP30LQ9HAJ7 183 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 WASHC3Q9Y3C0 194 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 KLF12Q9Y4X4 402 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 DPRXA6NFQ7 191 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 FCN3O75636 299 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 LINC00614P0C842 121 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 CCL3L1P16619 93 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 MFAP2P55001 183 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 TMEM200BQ69YZ2 307 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 C22orf34Q6ZV56 151 aa11.72□□□□□ -0.53
CLN6-215ENST00000636674 ZCCHC24Q8N2G6 241 aaKnown RBP11.72□□□□□ -0.53
CLN6-215ENST00000636674 SSBP3Q9BWW4 388 aaPredicted RBP11.72□□□□□ -0.53
CLN6-215ENST00000636674 A0A1B0GXF2 115 aa11.71□□□□□ -0.53
CLN6-215ENST00000636674 A6NNC1 897 aa11.71□□□□□ -0.53
CLN6-215ENST00000636674 C17orf100A8MU93 164 aa11.71□□□□□ -0.53
CLN6-215ENST00000636674 CRYGCP07315 174 aa11.71□□□□□ -0.53
CLN6-215ENST00000636674 PMCHL1Q16048 86 aa11.71□□□□□ -0.53
CLN6-215ENST00000636674 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
CLN6-215ENST00000636674 BORCS7Q96B45 105 aa11.71□□□□□ -0.53
CLN6-215ENST00000636674 RAXQ9Y2V3 346 aa11.71□□□□□ -0.53
CLN6-215ENST00000636674 GOLT1BQ9Y3E0 138 aa11.71□□□□□ -0.53
CLN6-215ENST00000636674 SVILO95425 2214 aa11.71□□□□□ -0.54
CLN6-215ENST00000636674 HYPMO75409 117 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 CA7P43166 264 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 FAM27E3Q08E93 113 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 C10orf55Q5SWW7 151 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 ETFRF1Q6IPR1 90 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 TMEM108Q6UXF1 575 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 KLHDC1Q8N7A1 406 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 PERPQ96FX8 193 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 SPENQ96T58 3664 aaKnown RBP11.7□□□□□ -0.54
CLN6-215ENST00000636674 TNFRSF13BO14836 293 aaPredicted RBP11.7□□□□□ -0.54
CLN6-215ENST00000636674 CCL8P80075 99 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 PAX2Q02962 417 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 VMA21Q3ZAQ7 101 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 CT83Q5H943 113 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 LINC00305Q7Z4B0 112 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 OR10X1Q8NGY0 326 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 ALKBH7Q9BT30 221 aaPredicted RBP11.7□□□□□ -0.54
CLN6-215ENST00000636674 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 MRPL36Q9P0J6 103 aaKnown RBP11.7□□□□□ -0.54
CLN6-215ENST00000636674 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
CLN6-215ENST00000636674 A0A1W2PPI3 338 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 REG1BP48304 166 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 MRGPRG-AS1Q2M3A8 158 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 ZNF841Q6ZN19 808 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 RBMXL3Q8N7X1 1067 aaKnown RBP11.69□□□□□ -0.54
CLN6-215ENST00000636674 TRGV9Q99603 122 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 MLST8Q9BVC4 326 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 SOX21Q9Y651 276 aaPredicted RBP11.69□□□□□ -0.54
CLN6-215ENST00000636674 ZZEF1O43149 2961 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 LOC400499M0QZD8 3231 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 NAV3Q8IVL0 2385 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 PPIAL4EA0A075B759 164 aa11.69□□□□□ -0.54
CLN6-215ENST00000636674 TRAV34A0A0B4J273 112 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms