RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FAM167A-AS1Q96KT0 104 aa11.34□□□□□ -0.59
CACNA1A-228ENST00000636610 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
CACNA1A-228ENST00000636610 A0A1W2PRD5 423 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 A0A1W2PRF3 423 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 A0A1W2PRM7 423 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 GPX1P07203 203 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 BRS3P32247 399 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 TDGF1P3P51864 188 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 ADIPOQQ15848 244 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF124Q15973 351 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 OR2D3Q8NGH3 330 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF331Q9NQX6 463 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 KIR2DL5BA0A0G2JN68 375 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 KIR2DL5BA0A0G2JPC4 375 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 A0A1B0GWJ7 208 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 SH2D7A6NKC9 451 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF137PP52743 207 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 Q6ZVH6 145 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 TCF24Q7RTU0 167 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 PIP4P1Q86T03 277 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 KIR2DL5AQ8N109 375 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 FAM222BQ8WU58 562 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 NDUFA4L2Q9NRX3 87 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF586Q9NXT0 402 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 S4R3C0 116 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 NKX6-3A6NJ46 265 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 APCSP02743 223 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 MMDQ15546 238 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 C2orf83Q53S99 150 aa11.33□□□□□ -0.6
CACNA1A-228ENST00000636610 SLC25A5P05141 298 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 PAFAH1B2P68402 229 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 TMEM183BQ1AE95 376 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 TMEM108Q6UXF1 575 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 OR5B3Q8NH48 314 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 SFXN3Q9BWM7 321 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 PTPRQQ9UMZ3 2332 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 TRAV8-1A0A0A6YYK1 113 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 A0A0G2JNJ9 132 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 DLL1O00548 723 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 GATA4P43694 442 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 COMPP49747 757 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 PPOXP50336 477 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 TNXAQ16473 311 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 GDF5OSQ5U4N7 250 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 RNASEKQ6P5S7 137 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 GNB1LQ9BYB4 327 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 Q9UFV3 132 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF257Q9Y2Q1 563 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 LINC00312Q9Y6C7 94 aa11.32□□□□□ -0.6
CACNA1A-228ENST00000636610 PPIAL4EA0A075B759 164 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 PGPA6NDG6 321 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 C17orf100A8MU93 164 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 PPIAL4DF5H284 164 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 H0Y8G0 127 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 FAM87AP0C7U9 286 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 PPIAL4FP0DN26 164 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 RAB4AP20338 218 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 COX7A1P24310 79 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 SPATA45Q537H7 98 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 PRR30Q53SZ7 412 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 NUDT10Q8NFP7 164 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 NUDT11Q96G61 164 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 NEU1Q99519 415 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 GAL3ST2Q9H3Q3 398 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 RAB9BQ9NP90 201 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 A0A1W2PPI3 338 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 IGF2BP2-AS1Q96M15 143 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 MCRIP2Q9BUT9 160 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 BET1LQ9NYM9 111 aa11.31□□□□□ -0.6
CACNA1A-228ENST00000636610 NPSP0C0P6 89 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 C3orf79P0CE67 100 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 TNFRSF1AP19438 455 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 Q56UQ5 140 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF841Q6ZN19 808 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 NUP35Q8NFH5 326 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 OSTCQ9NRP0 149 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF835Q9Y2P0 537 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 HIGD1CA8MV81 97 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 C16orf97H3BN30 126 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 NDUFB3O43676 98 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 AMY1AP04745 511 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 UBE2G1P62253 170 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 POU2AF1Q16633 256 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 C21orf62-AS1Q17RA5 79 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 OR4C13Q8NGP0 309 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 C22orf46C9J442 243 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 PEX7O00628 323 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF833PQ6ZTB9 187 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 OSR1Q8TAX0 266 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 TSKUQ8WUA8 353 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 TXN2Q99757 166 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 MIEN1Q9BRT3 115 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 TNFRSF19Q9NS68 423 aa11.3□□□□□ -0.6
CACNA1A-228ENST00000636610 IGKV1D-37A0A075B6S9 117 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms