RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022		Q6ZRM9	215 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	ZNF767P	Q75MW2	155 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	GBGT1	Q8N5D6	347 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	TMEM229B	Q8NBD8	167 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	DUSP18	Q8NEJ0	188 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	OR13C8	Q8NGS7	320 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	S100Z	Q8WXG8	99 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	LINC00476	Q8WZB0	136 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	ST8SIA2	Q92186	375 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	PINX1	Q96BK5	328 aa	Known RBP	5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	MIXL1	Q9H2W2	232 aa		5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.38	□□□□□ -1.55
CACNA1A-222	ENST00000636022	KIAA1109	Q2LD37	5005 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	IGKV3-7	A0A075B6H7	116 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022		A0A1B0GU03	582 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CXorf65	A6NEN9	183 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	NUPR2	A6NF83	97 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	GABARAP	H6UMI1	98 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	DFFB	O76075	338 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	ATG12	O94817	140 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CDS2	O95674	445 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	IFNA17	P01571	189 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CD5	P06127	495 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SNCA	P37840	140 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	ETV6	P41212	452 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	AKR1C2	P52895	323 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CMC4	P56277	68 aa	Predicted RBP	5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	TAS2R19	P59542	299 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	RAB14	P61106	215 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	FLI1	Q01543	452 aa	Predicted RBP	5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	PMS2P11	Q13670	270 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	MLANA	Q16655	118 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	STEAP1B	Q6NZ63	245 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	STX12	Q86Y82	276 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SLC35G3	Q8N808	338 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	ZFAND1	Q8TCF1	268 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	MARCH1	Q8TCQ1	289 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	C15orf40	Q8WUR7	153 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	ST6GAL2	Q96JF0	529 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SEC22C	Q9BRL7	303 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	GINS3	Q9BRX5	216 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	RTBDN	Q9BSG5	229 aa	Predicted RBP	5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CSTL1	Q9H114	145 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	MS4A6A	Q9H2W1	248 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	COPZ2	Q9P299	210 aa		5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	PUS1	Q9Y606	427 aa	Known RBP eCLIP	5.37	□□□□□ -1.55
CACNA1A-222	ENST00000636022	TRAV2	A0A0B4J234	112 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	IGHV3-66	A0A0C4DH42	116 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	MPTX1	A8MV57	137 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CORT	O00230	105 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	NDUFS6	O75380	124 aa	Known RBP	5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	RAB3D	O95716	219 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	IGKV1-17	P01599	117 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CRYBB3	P26998	211 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	HTR2B	P41595	481 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SUB1	P53999	127 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SPCS3	P61009	180 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	PAFAH1B2	P68402	229 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SSBP1	Q04837	148 aa	Known RBP	5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SCGB2B2	Q4G0G5	96 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	FAAP20	Q6NZ36	180 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	TCF24	Q7RTU0	167 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	FAM219A	Q8IW50	185 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	FAM24B	Q8N5W8	94 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CCDC71L	Q8N9Z2	235 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	OR4X1	Q8NH49	305 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	OR52E5	Q8NH55	327 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	GLYATL2	Q8WU03	294 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	GATAD1	Q8WUU5	269 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	RRNAD1	Q96FB5	475 aa	Known RBP	5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	TMEM222	Q9H0R3	208 aa		5.36	□□□□□ -1.55
CACNA1A-222	ENST00000636022	PKD1	P98161	4303 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CRYM-AS1	A6NIL9	109 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CENPX	A8MT69	81 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CTDSPL	O15194	276 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	LY6G6C	O95867	125 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	GIG44	P09565	113 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	H2AFB1	P0C5Y9	115 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	H2AFB2	P0C5Z0	115 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	OR5AC1	P0C628	307 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	MRPS10	P82664	201 aa	Known RBP	5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	MEF2D	Q14814	521 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SURF2	Q15527	256 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	LEMD1	Q68G75	181 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SELENOH	Q8IZQ5	122 aa	Known RBP	5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	TMEM217	Q8N7C4	229 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	TMEM170A	Q8WVE7	144 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	SMIM4	Q8WVI0	70 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	GPR146	Q96CH1	333 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	RARRES2	Q99969	163 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	BCL7B	Q9BQE9	202 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	PDCD10	Q9BUL8	212 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	C11orf68	Q9H3H3	251 aa	Known RBP	5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	NAA60	Q9H7X0	242 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	GPR132	Q9UNW8	380 aa		5.35	□□□□□ -1.55
CACNA1A-222	ENST00000636022	CBY1	Q9Y3M2	126 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms