RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 VWC2LB2RUY7 222 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 NUDT3O95989 172 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 SLC25A5P05141 298 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 PET117Q6UWS5 81 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 SMIM15Q7Z3B0 74 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 PLSCR4Q9NRQ2 329 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 ZNF492Q9P255 531 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 FAM231BA6NCW3 169 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 A6NJY4 79 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 CORTO00230 105 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 TMEM11P17152 192 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 ASPHD1Q5U4P2 390 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 PATE2Q6UY27 113 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 RBMXL3Q8N7X1 1067 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 THAP8Q8NA92 274 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 MAP1LC3CQ9BXW4 147 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 PRSS22Q9GZN4 317 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 RNF151Q2KHN1 245 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 PERPQ96FX8 193 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 NDFIP1Q9BT67 221 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 MLST8Q9BVC4 326 aa11.98□□□□□ -0.49
CACNA1A-220ENST00000635988 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 P01737 135 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 GATA4P43694 442 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 RBPMS2Q6ZRY4 209 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 TCF24Q7RTU0 167 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 OR4A5Q8NH83 315 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 NPIPB3Q92617 1050 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 ST6GALNAC6Q969X2 333 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 FMC1Q96HJ9 113 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 HARBI1Q96MB7 349 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 RNF7Q9UBF6 113 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 HSPB8Q9UJY1 196 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 PRR33A8MZF0 331 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 FSTL3O95633 263 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 ZNF841Q6ZN19 808 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 ZNF833PQ6ZTB9 187 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 BHLHA15Q7RTS1 189 aaPredicted RBP11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 LINC00305Q7Z4B0 112 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 C9orf106Q8NAJ2 232 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 ITLN1Q8WWA0 313 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 DKK4Q9UBT3 224 aa11.97□□□□□ -0.49
CACNA1A-220ENST00000635988 hDV102S1A0JD36 115 aa11.96□□□□□ -0.49
CACNA1A-220ENST00000635988 CD5LO43866 347 aa11.96□□□□□ -0.49
CACNA1A-220ENST00000635988 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-220ENST00000635988 GNG5P63218 68 aa11.96□□□□□ -0.49
CACNA1A-220ENST00000635988 DAZAP1Q96EP5 407 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-220ENST00000635988 CST9LQ9H4G1 147 aa11.96□□□□□ -0.49
CACNA1A-220ENST00000635988 SCRT2Q9NQ03 307 aa11.96□□□□□ -0.49
CACNA1A-220ENST00000635988 ZNF71Q9NQZ8 489 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-220ENST00000635988 MED13Q9UHV7 2174 aa11.96□□□□□ -0.5
CACNA1A-220ENST00000635988 PGPA6NDG6 321 aa11.96□□□□□ -0.5
CACNA1A-220ENST00000635988 SH2D7A6NKC9 451 aaPredicted RBP11.96□□□□□ -0.5
CACNA1A-220ENST00000635988 HIST1H1AQ02539 215 aaPredicted RBP11.96□□□□□ -0.5
CACNA1A-220ENST00000635988 MSMPQ1L6U9 139 aa11.96□□□□□ -0.5
CACNA1A-220ENST00000635988 TMEM177Q53S58 311 aa11.96□□□□□ -0.5
CACNA1A-220ENST00000635988 C5orf17Q8NAS9 161 aa11.96□□□□□ -0.5
CACNA1A-220ENST00000635988 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.5
CACNA1A-220ENST00000635988 SLC25A15Q9Y619 301 aa11.96□□□□□ -0.5
CACNA1A-220ENST00000635988 AHCTF1Q8WYP5 2266 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 C19orf71A6NCJ1 209 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 CHEK1O14757 476 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 SPRY3O43610 288 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 MOSP00540 346 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 SP9P0CG40 484 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 TMEM95Q3KNT9 176 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 OCIAD2Q56VL3 154 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 SPRNQ5BIV9 151 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 TMEM167AQ8TBQ9 72 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 PMCHL2Q9BQD1 86 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 LOC102724200A0A096LPH7 203 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 hADV38S2A0JD32 116 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 LTAP01374 205 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 GLRXP35754 106 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 SSBP2P81877 361 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 SARAFQ96BY9 339 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 FLYWCH2Q96CP2 140 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 PGLYRP4Q96LB8 373 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 GAFA1Q96PS6 74 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 VPS25Q9BRG1 176 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 FNDC4Q9H6D8 234 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 PROCRQ9UNN8 238 aa11.95□□□□□ -0.5
CACNA1A-220ENST00000635988 MUC21A0A0G2JKD1 596 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 MUC21A0A140T8X8 626 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 NBEAP1P0C6P0 100 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 MUC21Q5SSG8 566 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 FAM201AQ5SY85 155 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 LDLRAD2Q5SZI1 272 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 ZCCHC24Q8N2G6 241 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 GTSF1Q8WW33 167 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 RND1Q92730 232 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 ZNF788Q6ZQV5 615 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 OR5AN1Q8NGI8 311 aa11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 H1FXQ92522 213 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-220ENST00000635988 OR2T8A6NH00 312 aa11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 M0QZ24 198 aa11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 WT1-ASQ06250 92 aa11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 LINC00173Q6ZV60 143 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms