RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 K7EN84 100 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 ITGB1BP1O14713 200 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 RRHO14718 337 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 TNFRSF13BO14836 293 aaPredicted RBP12.5□□□□□ -0.41
CLN8-209ENST00000635970 FCN3O75636 299 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 GPX1P07203 203 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 RELBQ01201 579 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 COL5A1-AS1Q5SY13 56 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 CCL13Q99616 98 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 C19orf24Q9BVV8 132 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 RAB9BQ9NP90 201 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 OSTCQ9NRP0 149 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 V9GYV3 84 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 ANK3Q12955 4377 aaKnown RBP12.5□□□□□ -0.41
CLN8-209ENST00000635970 TGFAP01135 160 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 ZFP36P26651 326 aaKnown RBP12.5□□□□□ -0.41
CLN8-209ENST00000635970 SSTR5P35346 364 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 ATP5IP56385 69 aaPredicted RBP12.5□□□□□ -0.41
CLN8-209ENST00000635970 CX3CL1P78423 397 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 HLA-DRB5Q30154 266 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 CYB5R2Q6BCY4 276 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 FAM216BQ8N7L0 139 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 PPP1R35Q8TAP8 253 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 C1orf159Q96HA4 380 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 SLC45A2Q9UMX9 530 aa12.5□□□□□ -0.41
CLN8-209ENST00000635970 CUBNO60494 3623 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 IGKV1D-17A0A075B6S4 117 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 CD5LO43866 347 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 MORN2Q502X0 79 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 LINC01356Q8N9X3 169 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 VN1R17PQ8TDU5 208 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 S1PR3Q99500 378 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 TCF19Q9Y242 345 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 NSD1Q96L73 2696 aaPredicted RBP12.49□□□□□ -0.41
CLN8-209ENST00000635970 HELTA6NFD8 242 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 MSMBP08118 114 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 IER3P46695 156 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 THBS3P49746 956 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 GNG4P50150 75 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 ZNF841Q6ZN19 808 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 STPG3Q8N7X2 389 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 OR8B3Q8NGG8 313 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 OR8B2Q96RD0 313 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 PAM16Q9Y3D7 125 aa12.49□□□□□ -0.41
CLN8-209ENST00000635970 B4DSR2 109 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 RAB7AP51149 207 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 PRR20EP86478 221 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 PRR20CP86479 221 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 PRR20DP86480 221 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 PRR20BP86481 221 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 PRR20AP86496 221 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 PNKDQ8N490 385 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 OR4S2Q8NH73 311 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 GAFA1Q96PS6 74 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 SSBP3Q9BWW4 388 aaPredicted RBP12.48□□□□□ -0.41
CLN8-209ENST00000635970 ENY2Q9NPA8 101 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 METRNQ9UJH8 293 aa12.48□□□□□ -0.41
CLN8-209ENST00000635970 FOXA2Q9Y261 457 aaPredicted RBP12.48□□□□□ -0.41
CLN8-209ENST00000635970 IGHV3-43A0A0B4J1X8 118 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 C15orf61A6NNL5 157 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 SLC17A3O00476 420 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 ISLRO14498 428 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 ZNF253O75346 499 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 PROP1O75360 226 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 IGHV3-43DP0DP04 118 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 NPY1RP25929 384 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 COMPP49747 757 aaPredicted RBP12.47□□□□□ -0.41
CLN8-209ENST00000635970 SUMO1P63165 101 aaKnown RBP12.47□□□□□ -0.41
CLN8-209ENST00000635970 FAM53AQ6NSI3 398 aaPredicted RBP12.47□□□□□ -0.41
CLN8-209ENST00000635970 RASL11AQ6T310 242 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 C19orf35Q6ZS72 473 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 CD177Q8N6Q3 437 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.47□□□□□ -0.41
CLN8-209ENST00000635970 SLC35E1Q96K37 410 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 NCOR1P1Q9H4R4 102 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
CLN8-209ENST00000635970 YAE1D1Q9NRH1 226 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 TMEM140Q9NV12 185 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 GNG12Q9UBI6 72 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 ZFP30Q9Y2G7 519 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 MTORP42345 2549 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 DIRC3C9JPN6 131 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 M0R1X1 148 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 F2RL2O00254 374 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 HSPE1P61604 102 aaKnown RBP12.47□□□□□ -0.41
CLN8-209ENST00000635970 TDRG1Q3Y452 100 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 TIGITQ495A1 244 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 PQLC2Q6ZP29 291 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 ZNF788Q6ZQV5 615 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 ABHD12Q8N2K0 398 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 KLHDC1Q8N7A1 406 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 SLC24A4Q8NFF2 622 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 RFESDQ8TAC1 157 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 KCNS1Q96KK3 526 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 HIF1ANQ9NWT6 349 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 KAAG1Q9UBP8 84 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 UQCR10Q9UDW1 63 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 NAT8BQ9UHF3 227 aa12.47□□□□□ -0.41
CLN8-209ENST00000635970 SONP18583 2426 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms