RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 TMEM231Q9H6L2 316 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 TBC1D24Q9ULP9 559 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 SCGB1D2O95969 90 aa12.83□□□□□ -0.36
LIN28B-202ENST00000635857 C11orf87Q6NUJ2 197 aa12.83□□□□□ -0.36
LIN28B-202ENST00000635857 Q8N1Y9 231 aa12.83□□□□□ -0.36
LIN28B-202ENST00000635857 ZNF431Q8TF32 576 aaPredicted RBP12.83□□□□□ -0.36
LIN28B-202ENST00000635857 Q8WTZ3 238 aa12.83□□□□□ -0.36
LIN28B-202ENST00000635857 METTL26Q96S19 204 aa12.83□□□□□ -0.36
LIN28B-202ENST00000635857 SPAG8Q99932 426 aaPredicted RBP12.83□□□□□ -0.36
LIN28B-202ENST00000635857 RHPN1-AS1Q9BWJ2 59 aa12.83□□□□□ -0.36
LIN28B-202ENST00000635857 SMPXQ9UHP9 88 aa12.83□□□□□ -0.36
LIN28B-202ENST00000635857 A0A1W2PS18 150 aa12.82□□□□□ -0.36
LIN28B-202ENST00000635857 ZNF785A8K8V0 405 aa12.82□□□□□ -0.36
LIN28B-202ENST00000635857 CD5P06127 495 aa12.82□□□□□ -0.36
LIN28B-202ENST00000635857 FABP1P07148 127 aa12.82□□□□□ -0.36
LIN28B-202ENST00000635857 GPX4P36969 197 aaPredicted RBP12.82□□□□□ -0.36
LIN28B-202ENST00000635857 TIGITQ495A1 244 aa12.82□□□□□ -0.36
LIN28B-202ENST00000635857 TMEM170AQ8WVE7 144 aa12.82□□□□□ -0.36
LIN28B-202ENST00000635857 NPIPB3Q92617 1050 aa12.82□□□□□ -0.36
LIN28B-202ENST00000635857 ASCL2Q99929 193 aa12.82□□□□□ -0.36
LIN28B-202ENST00000635857 MRPL36Q9P0J6 103 aaKnown RBP12.82□□□□□ -0.36
LIN28B-202ENST00000635857 GSKIPQ9P0R6 139 aa12.82□□□□□ -0.36
LIN28B-202ENST00000635857 STRAPQ9Y3F4 350 aaKnown RBP12.82□□□□□ -0.36
LIN28B-202ENST00000635857 OR4C46A6NHA9 309 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 FAM25EA8MYX2 175 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 A8MZ25 164 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 TSPAN4O14817 238 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 IGLC1P0CG04 106 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 NPPCP23582 126 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 SPANXN5Q5MJ07 72 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 C12orf45Q8N5I9 185 aaPredicted RBP12.81□□□□□ -0.36
LIN28B-202ENST00000635857 GRAMD2BQ96HH9 432 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 SEC22CQ9BRL7 303 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 ZMAT4Q9H898 229 aa12.81□□□□□ -0.36
LIN28B-202ENST00000635857 GPN1Q9HCN4 374 aaPredicted RBP12.81□□□□□ -0.36
LIN28B-202ENST00000635857 IGHV3-49A0A0A0MS15 119 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 C5orf51A6NDU8 294 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 ZFP92A6NM28 416 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 MPTX1A8MV57 137 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 OR11H12B2RN74 326 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 CHEK1O14757 476 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 SSSCA1O60232 199 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 CD7P09564 240 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 YPEL3P61236 119 aaPredicted RBP12.8□□□□□ -0.36
LIN28B-202ENST00000635857 POLR2GP62487 172 aaKnown RBP eCLIP12.8□□□□□ -0.36
LIN28B-202ENST00000635857 ZBTB8BQ8NAP8 495 aaPredicted RBP12.8□□□□□ -0.36
LIN28B-202ENST00000635857 OR4D5Q8NGN0 318 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 ZFAND3Q9H8U3 227 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 PSENENQ9NZ42 101 aa12.8□□□□□ -0.36
LIN28B-202ENST00000635857 IGHV3OR16-13A0A075B7E8 117 aa12.79□□□□□ -0.36
LIN28B-202ENST00000635857 IGHV3-74A0A0B4J1X5 117 aa12.79□□□□□ -0.36
LIN28B-202ENST00000635857 H3BP45 60 aa12.79□□□□□ -0.36
LIN28B-202ENST00000635857 IGKV1-17P01599 117 aa12.79□□□□□ -0.36
LIN28B-202ENST00000635857 RPL11P62913 178 aaKnown RBP12.79□□□□□ -0.36
LIN28B-202ENST00000635857 ID3Q02535 119 aa12.79□□□□□ -0.36
LIN28B-202ENST00000635857 RNF2Q99496 336 aa12.79□□□□□ -0.36
LIN28B-202ENST00000635857 SRD5A3Q9H8P0 318 aa12.79□□□□□ -0.36
LIN28B-202ENST00000635857 CCSO14618 274 aa12.78□□□□□ -0.36
LIN28B-202ENST00000635857 IL4P05112 153 aa12.78□□□□□ -0.36
LIN28B-202ENST00000635857 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
LIN28B-202ENST00000635857 EIF2B2P49770 351 aaKnown RBP12.78□□□□□ -0.36
LIN28B-202ENST00000635857 SBSPONQ8IVN8 264 aa12.78□□□□□ -0.36
LIN28B-202ENST00000635857 DEFB125Q8N687 156 aa12.78□□□□□ -0.36
LIN28B-202ENST00000635857 RAB40CQ96S21 281 aa12.78□□□□□ -0.36
LIN28B-202ENST00000635857 C19orf73Q9NVV2 129 aa12.78□□□□□ -0.36
LIN28B-202ENST00000635857 PFDN2Q9UHV9 154 aa12.78□□□□□ -0.36
LIN28B-202ENST00000635857 U3KQK5 164 aa12.78□□□□□ -0.36
LIN28B-202ENST00000635857 IGKV3-7A0A075B6H7 116 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 L7N2F9 121 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 PRAF2O60831 178 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 TOMM40O96008 361 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 IL5P05113 134 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 HNRNPCP07910 306 aaKnown RBP eCLIP12.77□□□□□ -0.372e-6■■■■□ 21.4
LIN28B-202ENST00000635857 VAMP2P63027 116 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 AKR1C1Q04828 323 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 GAMTQ14353 236 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 GSG1LQ6UXU4 331 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 TCF24Q7RTU0 167 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 ST8SIA2Q92186 375 aa12.77□□□□□ -0.37
LIN28B-202ENST00000635857 IGHV3-66A0A0C4DH42 116 aa12.76□□□□□ -0.37
LIN28B-202ENST00000635857 DNASE2O00115 360 aaPredicted RBP12.76□□□□□ -0.37
LIN28B-202ENST00000635857 NUP62P37198 522 aaPredicted RBP12.76□□□□□ -0.37
LIN28B-202ENST00000635857 TFPI2P48307 235 aa12.76□□□□□ -0.37
LIN28B-202ENST00000635857 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
LIN28B-202ENST00000635857 OR51G1Q8NGK1 321 aa12.76□□□□□ -0.37
LIN28B-202ENST00000635857 ZNF414Q96IQ9 312 aa12.76□□□□□ -0.37
LIN28B-202ENST00000635857 SMIM8Q96KF7 97 aa12.76□□□□□ -0.37
LIN28B-202ENST00000635857 VSIRQ9H7M9 311 aa12.76□□□□□ -0.37
LIN28B-202ENST00000635857 RABAC1Q9UI14 185 aa12.76□□□□□ -0.37
LIN28B-202ENST00000635857 SMCO3A2RU48 225 aa12.75□□□□□ -0.37
LIN28B-202ENST00000635857 INMT-MINDY4F8WBC2 141 aa12.75□□□□□ -0.37
LIN28B-202ENST00000635857 PVALBP20472 110 aaPredicted RBP12.75□□□□□ -0.37
LIN28B-202ENST00000635857 CRYBB3P26998 211 aa12.75□□□□□ -0.37
LIN28B-202ENST00000635857 TAS2R30P59541 319 aa12.75□□□□□ -0.37
LIN28B-202ENST00000635857 IFITM3Q01628 133 aa12.75□□□□□ -0.37
LIN28B-202ENST00000635857 OR8G2PQ6IF36 304 aa12.75□□□□□ -0.37
LIN28B-202ENST00000635857 NRARPQ7Z6K4 114 aa12.75□□□□□ -0.37
LIN28B-202ENST00000635857 C2orf50Q96LR7 162 aa12.75□□□□□ -0.37
LIN28B-202ENST00000635857 PBDC1Q9BVG4 233 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms