RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 SORL1Q92673 2214 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 IGHV3OR16-8A0A075B7F1 116 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 C7orf66A4D0T2 115 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 K7EMT4 169 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 L7N2F9 121 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 TSC22D2O75157 780 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 IGLC1P0CG04 106 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 OR10J1P30954 320 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 VAMP2P63027 116 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 RGS21Q2M5E4 152 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 OR2K2Q8NGT1 345 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 PRR25Q96S07 402 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 GINS3Q9BRX5 216 aa11.74□□□□□ -0.53
CLN6-211ENST00000635754 TECRQ9NZ01 308 aaKnown RBP11.74□□□□□ -0.53
CLN6-211ENST00000635754 MRPL27Q9P0M9 148 aaKnown RBP11.74□□□□□ -0.53
CLN6-211ENST00000635754 PUS1Q9Y606 427 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLN6-211ENST00000635754 K7EPK0 472 aa11.73□□□□□ -0.53
CLN6-211ENST00000635754 IGKV1-17P01599 117 aa11.73□□□□□ -0.53
CLN6-211ENST00000635754 PVALBP20472 110 aaPredicted RBP11.73□□□□□ -0.53
CLN6-211ENST00000635754 PAX9P55771 341 aa11.73□□□□□ -0.53
CLN6-211ENST00000635754 S100A10P60903 97 aa11.73□□□□□ -0.53
CLN6-211ENST00000635754 GAMTQ14353 236 aa11.73□□□□□ -0.53
CLN6-211ENST00000635754 TIGITQ495A1 244 aa11.73□□□□□ -0.53
CLN6-211ENST00000635754 TOMM20LQ6UXN7 152 aa11.73□□□□□ -0.53
CLN6-211ENST00000635754 ZNF414Q96IQ9 312 aa11.73□□□□□ -0.53
CLN6-211ENST00000635754 WI2-2373I1.2A0A1W2PRP0 233 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 PRSS46E5RG02 174 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 ZNF207O43670 478 aaKnown RBP11.72□□□□□ -0.53
CLN6-211ENST00000635754 SIX6O95475 246 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 C8orf88P0DMB2 117 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 GP9P14770 177 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 YPEL3P61236 119 aaPredicted RBP11.72□□□□□ -0.53
CLN6-211ENST00000635754 IL15RAQ13261 267 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 RAB32Q13637 225 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 DEFB114Q30KQ6 69 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 CD300EQ496F6 205 aaPredicted RBP11.72□□□□□ -0.53
CLN6-211ENST00000635754 OR8G2PQ6IF36 304 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 MRAPQ8TCY5 172 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 ALG5Q9Y673 324 aa11.72□□□□□ -0.53
CLN6-211ENST00000635754 K7EIL1 84 aa11.71□□□□□ -0.53
CLN6-211ENST00000635754 CYCSP99999 105 aaKnown RBP11.71□□□□□ -0.53
CLN6-211ENST00000635754 BTNL8Q6UX41 500 aa11.71□□□□□ -0.53
CLN6-211ENST00000635754 TMEM14EPQ6UXP3 125 aa11.71□□□□□ -0.53
CLN6-211ENST00000635754 NMES1Q9C002 83 aa11.71□□□□□ -0.53
CLN6-211ENST00000635754 ZFAND3Q9H8U3 227 aa11.71□□□□□ -0.53
CLN6-211ENST00000635754 MLXQ9UH92 298 aa11.71□□□□□ -0.53
CLN6-211ENST00000635754 TRAV14DV4A0A0A6YYC5 116 aa11.7□□□□□ -0.54
CLN6-211ENST00000635754 ZFP92A6NM28 416 aa11.7□□□□□ -0.54
CLN6-211ENST00000635754 METTL15P1P0C7V9 234 aa11.7□□□□□ -0.54
CLN6-211ENST00000635754 BCAP31P51572 246 aa11.7□□□□□ -0.54
CLN6-211ENST00000635754 ACOT7LQ6ZUV0 252 aa11.7□□□□□ -0.54
CLN6-211ENST00000635754 OR10P1Q8NGE3 313 aa11.7□□□□□ -0.54
CLN6-211ENST00000635754 Q8WTZ3 238 aa11.7□□□□□ -0.54
CLN6-211ENST00000635754 MGAT4CQ9UBM8 478 aa11.7□□□□□ -0.54
CLN6-211ENST00000635754 IGHV7-4-1A0A0J9YVY3 117 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 IZUMO1RA6ND01 250 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 FABP1P07148 127 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 BMI1P35226 326 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 CAV2P51636 162 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 H2BFSP57053 126 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 AKR1C1Q04828 323 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 SMCO3A2RU48 225 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 PMS2P5A8MQ11 134 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 CCNKO75909 580 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 SCAF4O95104 1147 aaKnown RBP11.69□□□□□ -0.54
CLN6-211ENST00000635754 TOMM40O96008 361 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 RLN2P04090 185 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 RD3LP0DJH9 198 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 TMEM61Q8N0U2 210 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 METTL26Q96S19 204 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 C11orf1Q9H5F2 150 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 SELENOKQ9Y6D0 94 aa11.69□□□□□ -0.54
CLN6-211ENST00000635754 TRAV25A0A0B4J276 109 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 DEDDO75618 318 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 IL4P05112 153 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 PSG1P11464 419 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 NPPCP23582 126 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 RRAS2P62070 204 aaPredicted RBP11.68□□□□□ -0.54
CLN6-211ENST00000635754 DLK1P80370 383 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 GUCA2BQ16661 112 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 LRRC37A5PQ49AS3 106 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 RBPMS2Q6ZRY4 209 aaKnown RBP11.68□□□□□ -0.54
CLN6-211ENST00000635754 GTSCR1Q86UQ5 136 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 THAP8Q8NA92 274 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 WDR89Q96FK6 387 aaPredicted RBP11.68□□□□□ -0.54
CLN6-211ENST00000635754 NARS2Q96I59 477 aaKnown RBP11.68□□□□□ -0.54
CLN6-211ENST00000635754 TRGV9Q99603 122 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 RHPN1-AS1Q9BWJ2 59 aa11.68□□□□□ -0.54
CLN6-211ENST00000635754 LYRM2Q9NU23 88 aaPredicted RBP11.68□□□□□ -0.54
CLN6-211ENST00000635754 IGKV1D-37A0A075B6S9 117 aa11.67□□□□□ -0.54
CLN6-211ENST00000635754 IGHV3-49A0A0A0MS15 119 aa11.67□□□□□ -0.54
CLN6-211ENST00000635754 FNDC10F2Z333 226 aa11.67□□□□□ -0.54
CLN6-211ENST00000635754 CHEK1O14757 476 aa11.67□□□□□ -0.54
CLN6-211ENST00000635754 OXA1LQ15070 435 aa11.67□□□□□ -0.54
CLN6-211ENST00000635754 LAMTOR1Q6IAA8 161 aa11.67□□□□□ -0.54
CLN6-211ENST00000635754 OR51G1Q8NGK1 321 aa11.67□□□□□ -0.54
CLN6-211ENST00000635754 MED28Q9H204 178 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms