RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 A0A1W2PRV1 198 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 MAP1LC3B2A6NCE7 125 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 C15orf61A6NNL5 157 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 B4DEV8 164 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 CYB5BO43169 146 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 FSTL3O95633 263 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 TFF1P04155 84 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 SAA2P0DJI9 122 aaPredicted RBP5.67□□□□□ -1.5
LINC01108-202ENST00000635227 CGB3P0DN86 165 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 CGB7P0DN87 165 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 DLK1P80370 383 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 C17orf58Q2M2W7 97 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 VWC2Q2TAL6 325 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 HFEQ30201 348 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 PDLIM3Q53GG5 364 aaPredicted RBP5.67□□□□□ -1.5
LINC01108-202ENST00000635227 C16orf54Q6UWD8 224 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 HEPN1Q6WQI6 88 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 SLC25A48Q6ZT89 311 aaKnown RBP5.67□□□□□ -1.5
LINC01108-202ENST00000635227 CENPVQ7Z7K6 275 aaPredicted RBP5.67□□□□□ -1.5
LINC01108-202ENST00000635227 FAM216BQ8N7L0 139 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 C8orf31Q8N9H6 132 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 DEFB108BQ8NET1 73 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 MBD3L1Q8WWY6 194 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 H1FXQ92522 213 aaKnown RBP5.67□□□□□ -1.5
LINC01108-202ENST00000635227 TNFRSF14Q92956 283 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 TMEM186Q96B77 213 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 C5orf30Q96GV9 206 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 CCL13Q99616 98 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 DCTN5Q9BTE1 182 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 ACTR3CQ9C0K3 210 aaPredicted RBP5.67□□□□□ -1.5
LINC01108-202ENST00000635227 MAP1LC3BQ9GZQ8 125 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 RPS10P5Q9NQ39 176 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 SLC35D1Q9NTN3 355 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 SLC39A9Q9NUM3 307 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 TMEM106BQ9NUM4 274 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 KAAG1Q9UBP8 84 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 FOXA2Q9Y261 457 aaPredicted RBP5.67□□□□□ -1.5
LINC01108-202ENST00000635227 ZNF257Q9Y2Q1 563 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 USF3Q68DE3 2245 aa5.67□□□□□ -1.5
LINC01108-202ENST00000635227 TET2Q6N021 2002 aaPredicted RBP5.67□□□□□ -1.5
LINC01108-202ENST00000635227 IGHV1-69-2A0A0G2JMI3 117 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 FNDC10F2Z333 226 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 CCL21O00585 134 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 MT-CO2P00403 227 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 ARG1P05089 322 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 BCL2P10415 239 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 CD1BP29016 333 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 NPBWR1P48145 328 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 PSMB3P49720 205 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 FHITP49789 147 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 GNG10P50151 68 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 PPOXP50336 477 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
LINC01108-202ENST00000635227 RAB5BP61020 215 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 HSPE1P61604 102 aaKnown RBP5.66□□□□□ -1.5
LINC01108-202ENST00000635227 FAM74A3Q4VXF1 159 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 RPL39P5Q59GN2 51 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 FFAR4Q5NUL3 377 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 AVPI1Q5T686 147 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 SLC35E3Q7Z769 313 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 PDPNQ86YL7 162 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 MAPKAPK5-AS1Q8N8E1 139 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 ZNF439Q8NDP4 499 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 OR10X1Q8NGY0 326 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 OR4A5Q8NH83 315 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 NANPQ8TBE9 248 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 TVP23CQ96ET8 276 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 TIMD4Q96H15 378 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 WFIKKN1Q96NZ8 548 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 OR4C12Q96R67 309 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 TXNDC17Q9BRA2 123 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 RSG1Q9BU20 258 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 TUBA4BQ9H853 241 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 PLEKHA3Q9HB20 300 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 VAX2Q9UIW0 290 aa5.66□□□□□ -1.5
LINC01108-202ENST00000635227 AMMECR1Q9Y4X0 333 aaPredicted RBP5.66□□□□□ -1.5
LINC01108-202ENST00000635227 PKDREJQ9NTG1 2253 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 DOCK11Q5JSL3 2073 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 A0A087WWC5 75 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 IGHV4-61A0A0C4DH41 118 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 A0A1B0GV50 99 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 LOC105371267A0A1B0GV96 52 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 A0A1W2PN81 502 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 A0A1W2PPV4 95 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 SMCO3A2RU48 225 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 FAM74A7A6NL05 159 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 SHISA9B4DS77 424 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 NUPL2O15504 423 aaKnown RBP5.65□□□□□ -1.5
LINC01108-202ENST00000635227 IGHV4-59P01825 116 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 RBP4P02753 201 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 IFNA4P05014 189 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 OR9G9P0C7N8 305 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 OR13C7P0DN81 318 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 USF1P22415 310 aaPredicted RBP5.65□□□□□ -1.5
LINC01108-202ENST00000635227 NPY1RP25929 384 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 MC5RP33032 325 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 CHRNA7P36544 502 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 CDC34P49427 236 aaPredicted RBP5.65□□□□□ -1.5
LINC01108-202ENST00000635227 HAGHQ16775 308 aa5.65□□□□□ -1.5
LINC01108-202ENST00000635227 VMA21Q3ZAQ7 101 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms