RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CEP295Q9C0D2 2601 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 A0A087X0T9 212 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 TRBV7-6A0A0J9YX20 115 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF503-AS2A6NEH8 195 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 DNAJC9-AS1A6NH13 148 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 KRASP01116 189 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 SPINK8P0C7L1 97 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 TMBIM6P55061 237 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 SYNJ2BPP57105 145 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 TAS2R19P59542 299 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 TIMM10P62072 90 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 UBA52P62987 128 aaKnown RBP3.67□□□□□ -1.82
SDCBP-213ENST00000630925 KRTAP1-1Q07627 177 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 WDR38Q5JTN6 314 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 DNAJC24Q6P3W2 148 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF429Q86V71 674 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 LRP11Q86VZ4 500 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 C1orf174Q8IYL3 243 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 LINC00471Q8N535 108 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 SGMS2Q8NHU3 365 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 DDB2Q92466 427 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 CCL13Q99616 98 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 TSSK6Q9BXA6 273 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 MPC1Q9Y5U8 109 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 F11RQ9Y624 299 aaKnown RBP3.67□□□□□ -1.82
SDCBP-213ENST00000630925 DSPP15924 2871 aaKnown RBP3.67□□□□□ -1.82
SDCBP-213ENST00000630925 FBN3Q75N90 2809 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 LOC285556D6RIA3 1793 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF727A8MUV8 499 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 LOC730098B7Z3J9 87 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 LGALS9O00182 355 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 TNFP01375 233 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 HLA-DQB1P01920 261 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 CD2P06729 351 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 PRSS1P07477 247 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 CRISP2P16562 243 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 CRYGSP22914 178 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 IL2RGP31785 369 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 AKR1C2P52895 323 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 NDUFV3P56181 108 aaKnown RBP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 PLGLB1Q02325 96 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 DIAPH2-AS1Q14236 149 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 MARCH3Q86UD3 253 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 RPS19BP1Q86WX3 136 aaKnown RBP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 DCANP1Q8TF63 244 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 RTN4IP1Q8WWV3 396 aaPredicted RBP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 ELSPBP1Q96BH3 223 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 MIEN1Q9BRT3 115 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 SNRNP25Q9BV90 132 aaKnown RBP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 IL25Q9H293 177 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 RERGLQ9H628 205 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 CACNG5Q9UF02 275 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 RNF11Q9Y3C5 154 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 ARID1BQ8NFD5 2236 aaPredicted RBP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 TEX15Q9BXT5 2789 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 FANCMQ8IYD8 2048 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 A0A1W2PRS3 328 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 TLCD2A6NGC4 264 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 ETV2O00321 342 aaPredicted RBP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 PRSS2P07478 247 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 ACVRL1P37023 503 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 DAPP51397 102 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 ADIGQ0VDE8 80 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 UBE2NLQ5JXB2 153 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 C1orf140Q5VVS0 124 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 SUMO4Q6EEV6 95 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF720Q7Z2F6 126 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 MSRB3Q8IXL7 192 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 RPP25LQ8N5L8 163 aaKnown RBP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 OR2T10Q8NGZ9 312 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 MRPL30Q8TCC3 161 aaKnown RBP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 TWIST2Q8WVJ9 160 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 TAF15Q92804 592 aaKnown RBP eCLIP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 DPH3Q96FX2 82 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 MARCOQ9UEW3 520 aaPredicted RBP3.66□□□□□ -1.82
SDCBP-213ENST00000630925 FUT9Q9Y231 359 aa3.66□□□□□ -1.82
SDCBP-213ENST00000630925 GREB1LQ9C091 1923 aaPredicted RBP3.65□□□□□ -1.82
SDCBP-213ENST00000630925 IGF2RP11717 2491 aa3.65□□□□□ -1.82
SDCBP-213ENST00000630925 MEIS3P1A6NDR6 274 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 CD300LBA8K4G0 201 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 B4DEV8 164 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 DEDDO75618 318 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 IGLC1P0CG04 106 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 SPINK2P20155 84 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF93P35789 620 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-213ENST00000630925 MSMO1Q15800 293 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 Q6YL49 198 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 LINC00596Q86U02 117 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 C18orf15Q96N68 181 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 WWC2-AS2Q96NR7 200 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 WDR61Q9GZS3 305 aaKnown RBP3.65□□□□□ -1.83
SDCBP-213ENST00000630925 CA10Q9NS85 328 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 MIA3Q5JRA6 1907 aa3.65□□□□□ -1.83
SDCBP-213ENST00000630925 TRAV9-2A0A087WT02 112 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 DPRXA6NFQ7 191 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 EPM2AB3EWF7 344 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 CD5LO43866 347 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 COX7A2P2O60397 106 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 CD48P09326 243 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms