RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 RNF182Q8N6D2 247 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 CHCHD5Q9BSY4 110 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 IZUMO1RA6ND01 250 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 PSMG4Q5JS54 123 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 A0A0G2JMZ2 1700 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 LRRC37A2A6NM11 1700 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 PVRIGQ6DKI7 326 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 WBP1Q96G27 269 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 SEPSECSQ9HD40 501 aaKnown RBP9.79□□□□□ -0.84
SHPRH-211ENST00000629427 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
SHPRH-211ENST00000629427 NAT1P18440 290 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 TDGF1P3P51864 188 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 FOXF2Q12947 444 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 ZNF257Q9Y2Q1 563 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 DYSFO75923 2080 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 STAG3L3P0CL85 134 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 ERVK11-1P61568 191 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 NHLRC3Q5JS37 347 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 ZNF600Q6ZNG1 722 aa9.79□□□□□ -0.84
SHPRH-211ENST00000629427 PRADC1Q9BSG0 188 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 GHRHP01286 108 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 CD8AP01732 235 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 GNLYP22749 145 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 CKS1BP61024 79 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 FAM209BQ5JX69 171 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 OR5A1Q8NGJ0 315 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 SSC4DQ8WTU2 575 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 NCKAP5O14513 1909 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 A0A1B0GW15 77 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 CD28P10747 220 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 IGHV3-64A0A075B6Q5 118 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 TMEM144Q7Z5S9 345 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 PINLYPA6NC86 204 aa9.78□□□□□ -0.84
SHPRH-211ENST00000629427 ZNF672Q499Z4 452 aaPredicted RBP9.77□□□□□ -0.84
SHPRH-211ENST00000629427 FAM166AQ6J272 317 aa9.77□□□□□ -0.84
SHPRH-211ENST00000629427 ASCL4Q6XD76 172 aa9.77□□□□□ -0.84
SHPRH-211ENST00000629427 LHFPL4Q7Z7J7 247 aa9.77□□□□□ -0.84
SHPRH-211ENST00000629427 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 PAX2Q02962 417 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 SRSF1Q07955 248 aaKnown RBP eCLIP9.77□□□□□ -0.85
SHPRH-211ENST00000629427 KLRD1Q13241 179 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 A0A1B0GWB2 263 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 IGHV1-46P01743 117 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 IGHV3-73A0A0B4J1V6 119 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 FXYD7P58549 80 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 DEPPQ9NTK1 212 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 CDK2AP2O75956 126 aa9.77□□□□□ -0.85
SHPRH-211ENST00000629427 A0A0U1RRA0 63 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 S100A7L2Q5SY68 101 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 OR10W1Q8NGF6 305 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 VWCEQ96DN2 955 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 SFTA2Q6UW10 78 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 EPDR1Q9UM22 224 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 TRAV41A0A0B4J266 112 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 LYZL4Q96KX0 146 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 A0A087WX48 190 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 LINC00614P0C842 121 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 PYYP10082 97 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 C18orf12Q96KH6 178 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 SSBP4Q9BWG4 385 aaPredicted RBP9.76□□□□□ -0.85
SHPRH-211ENST00000629427 SLC25A15Q9Y619 301 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 MLNRO43193 412 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 RIPPLY3P57055 190 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 LINC00158P58513 81 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 FAM169BQ8N8A8 192 aa9.76□□□□□ -0.85
SHPRH-211ENST00000629427 CD59P13987 128 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 TRBV6-7A0A0A0MS04 114 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 ZFP36L1Q07352 338 aaKnown RBP9.75□□□□□ -0.85
SHPRH-211ENST00000629427 EFNB1P98172 346 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 ZNF525Q8N782 197 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 IGHV2-26A0A0B4J1V2 119 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 IGKV1D-13A0A0B4J2D9 117 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 IGKV1-13P0DP09 117 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 RCHY1Q96PM5 261 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 CYSLTR1Q9Y271 337 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 IGLV3-12A0A075B6K2 115 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 C3orf56Q8N813 242 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 SPAG8Q99932 426 aaPredicted RBP9.75□□□□□ -0.85
SHPRH-211ENST00000629427 CST9LQ9H4G1 147 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 NPIPB5A8MRT5 1133 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 C15orf32Q32M92 178 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 TMEM200BQ69YZ2 307 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 TMEM86BQ8N661 226 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 PSG8Q9UQ74 426 aa9.75□□□□□ -0.85
SHPRH-211ENST00000629427 OR2K2Q8NGT1 345 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 GVINP1Q7Z2Y8 2422 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 CMC4P56277 68 aaPredicted RBP9.74□□□□□ -0.85
SHPRH-211ENST00000629427 RPL15P61313 204 aaKnown RBP9.74□□□□□ -0.85
SHPRH-211ENST00000629427 DEFB104AQ8WTQ1 72 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 CHTOPQ9Y3Y2 248 aaKnown RBP9.74□□□□□ -0.85
SHPRH-211ENST00000629427 LOC102723996A0A087X1L8 192 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 SRP19P09132 144 aaKnown RBP9.74□□□□□ -0.85
SHPRH-211ENST00000629427 KLHL30-AS1Q8NEE0 82 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 MBNL3Q9NUK0 354 aaKnown RBP9.74□□□□□ -0.85
SHPRH-211ENST00000629427 A0A1B0GTI1 187 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 CA1P00915 261 aaPredicted RBP9.74□□□□□ -0.85
SHPRH-211ENST00000629427 BRD3OSQ6XYD6 125 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms