RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 UBE2G2P60604 165 aa10□□□□□ -0.81
SYNGAP1-207ENST00000628646 FAM71F2Q6NXP2 309 aa10□□□□□ -0.81
SYNGAP1-207ENST00000628646 RNF24Q9Y225 148 aa10□□□□□ -0.81
SYNGAP1-207ENST00000628646 PAGE4O60829 102 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 OR5G3P0C626 314 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 VWC2Q2TAL6 325 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 ACSM6Q6P461 480 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 GSX1Q9H4S2 264 aaPredicted RBP9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 FOXA2Q9Y261 457 aaPredicted RBP9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 CA2P00918 260 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 VDAC2P45880 294 aaPredicted RBP9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 PMS2P11Q13670 270 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 ANAPC16Q96DE5 110 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 BET1LQ9NYM9 111 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 C2CD3Q4AC94 2353 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 FAM78BQ5VT40 261 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 CACNG8Q8WXS5 425 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 ARPC1AQ92747 370 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 UBR5O95071 2799 aaPredicted RBP9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 A0A087WWC5 75 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 EIF3GO75821 320 aaKnown RBP eCLIP9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 CGB3P0DN86 165 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 CGB7P0DN87 165 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 C1QL4Q86Z23 238 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 RPP25LQ8N5L8 163 aaKnown RBP9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 TANC2Q9HCD6 1990 aa9.99□□□□□ -0.81
SYNGAP1-207ENST00000628646 SNRPEP62304 92 aaKnown RBP9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 STXBP6Q8NFX7 210 aa9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 OR1L6Q8NGR2 347 aa9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 S100A8P05109 93 aa9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 PSG5Q15238 335 aa9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 SOX21Q9Y651 276 aaPredicted RBP9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 TNCP24821 2201 aa9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 TNFRSF13BO14836 293 aaPredicted RBP9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 C10orf55Q5SWW7 151 aa9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 PQLC2Q6ZP29 291 aa9.98□□□□□ -0.81
SYNGAP1-207ENST00000628646 CNTFRP26992 372 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 ELOBQ15370 118 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 C5orf64Q2M2E5 130 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 ZNF833PQ6ZTB9 187 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 PIP4P2Q8N4L2 257 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 PLXNB1O43157 2135 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 AVPP01185 164 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 CXCL1P09341 107 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 PRCDQ00LT1 54 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 RELBQ01201 579 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 SRSF12Q8WXF0 261 aaKnown RBP9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 MAST4O15021 2626 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 A0A1W2PRX2 142 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 FAM181BA6NEQ2 426 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 IGLV1-47P01700 117 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 MIC13Q5XKP0 118 aa9.97□□□□□ -0.81
SYNGAP1-207ENST00000628646 PHOX2AO14813 284 aa9.96□□□□□ -0.81
SYNGAP1-207ENST00000628646 OR10J1P30954 320 aa9.96□□□□□ -0.81
SYNGAP1-207ENST00000628646 DLX6P56179 175 aa9.96□□□□□ -0.81
SYNGAP1-207ENST00000628646 FAM210BQ96KR6 192 aa9.96□□□□□ -0.81
SYNGAP1-207ENST00000628646 CHRDL1Q9BU40 450 aa9.96□□□□□ -0.81
SYNGAP1-207ENST00000628646 ZNF430Q9H8G1 570 aaPredicted RBP9.96□□□□□ -0.81
SYNGAP1-207ENST00000628646 AP4M1O00189 453 aa9.96□□□□□ -0.81
SYNGAP1-207ENST00000628646 GPX4P36969 197 aaPredicted RBP9.96□□□□□ -0.81
SYNGAP1-207ENST00000628646 Q8WTZ3 238 aa9.96□□□□□ -0.81
SYNGAP1-207ENST00000628646 PRSS46E5RG02 174 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 TPPP2P59282 170 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 ZNF343Q6P1L6 599 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 TMEM144Q7Z5S9 345 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 ZNF329Q86UD4 541 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 RNASEH2CQ8TDP1 164 aaKnown RBP9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 FNDC10F2Z333 226 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 TRGV3P03979 118 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 RPL11P62913 178 aaKnown RBP9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 TEX45Q8NA69 505 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 OR4X2Q8NGF9 303 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 DDB2Q92466 427 aa9.96□□□□□ -0.82
SYNGAP1-207ENST00000628646 ZNF320A2RRD8 509 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 IGHV3-48P01763 117 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 CD81P60033 236 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 SERTAD4Q9NUC0 356 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 CNN1P51911 297 aaKnown RBP9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 NDUFA6P56556 154 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 CX3CL1P78423 397 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 OR5AN1Q8NGI8 311 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 GATAD1Q8WUU5 269 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 TMEM170AQ8WVE7 144 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 FRZBQ92765 325 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 C1orf159Q96HA4 380 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 C12orf57Q99622 126 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 VPREB3Q9UKI3 123 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 S4R3C0 116 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 IFITM10A6NMD0 228 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 C15orf62A8K5M9 175 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 GNG7O60262 68 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 POU2AF1Q16633 256 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 SLC16A13Q7RTY0 426 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 ZNF439Q8NDP4 499 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 CMTM2Q8TAZ6 248 aa9.95□□□□□ -0.82
SYNGAP1-207ENST00000628646 CRYBG3Q68DQ2 2970 aa9.94□□□□□ -0.82
SYNGAP1-207ENST00000628646 GALR1P47211 349 aa9.94□□□□□ -0.82
SYNGAP1-207ENST00000628646 RPL29P47914 159 aaKnown RBP9.94□□□□□ -0.82
SYNGAP1-207ENST00000628646 DAZAP1Q96EP5 407 aaKnown RBP9.94□□□□□ -0.82
SYNGAP1-207ENST00000628646 SIGLEC9Q9Y336 463 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms