RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 GAS1P54826 345 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 SRSF7Q16629 238 aaKnown RBP eCLIP10.58□□□□□ -0.72
SCN8A-209ENST00000627620 C10orf55Q5SWW7 151 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 VMO1Q7Z5L0 202 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 VSIRQ9H7M9 311 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 EFNA4P52798 201 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 GFI1BQ5VTD9 330 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 OCC1Q8TAD7 63 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 TRAV5A0A0B4J249 113 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 CD33P20138 364 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 IGHV1-8P0DP01 117 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 MALP21145 153 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 NSUN5P1Q3KNT7 163 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 PSMG4Q5JS54 123 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 LHFPL4Q7Z7J7 247 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 TMEM170AQ8WVE7 144 aa10.58□□□□□ -0.72
SCN8A-209ENST00000627620 TREML4Q6UXN2 200 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 HEPN1Q6WQI6 88 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 SIGLEC15Q6ZMC9 328 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 ZNF257Q9Y2Q1 563 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 DICER1Q9UPY3 1922 aaKnown RBP10.57□□□□□ -0.72
SCN8A-209ENST00000627620 PSPNO60542 156 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 SRSF1Q07955 248 aaKnown RBP eCLIP10.57□□□□□ -0.72
SCN8A-209ENST00000627620 CLPSP04118 112 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 KIR3DL3Q8N743 410 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 SLC25A15Q9Y619 301 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 PRB4P10163 310 aaPredicted RBP10.57□□□□□ -0.72
SCN8A-209ENST00000627620 DSCR9P59020 149 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 AKAP6Q13023 2319 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 A0A1B0GWB2 263 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 TMEM178BH3BS89 294 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 CD177Q8N6Q3 437 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 LCTP09848 1927 aa10.57□□□□□ -0.72
SCN8A-209ENST00000627620 KLRD1Q13241 179 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 TMEM219Q86XT9 240 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 MBNL3Q9NUK0 354 aaKnown RBP10.56□□□□□ -0.72
SCN8A-209ENST00000627620 PDCD11Q14690 1871 aaKnown RBP10.56□□□□□ -0.72
SCN8A-209ENST00000627620 RALGAPA1Q6GYQ0 2036 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 INTS1Q8N201 2190 aaKnown RBP10.56□□□□□ -0.72
SCN8A-209ENST00000627620 TRGV4A0A0C4DH28 118 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 RBMY1BA6NDE4 496 aaKnown RBP10.56□□□□□ -0.72
SCN8A-209ENST00000627620 RBMY1EA6NEQ0 496 aaKnown RBP10.56□□□□□ -0.72
SCN8A-209ENST00000627620 OVOL1O14753 267 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 RBMY1DP0C7P1 496 aaKnown RBP10.56□□□□□ -0.72
SCN8A-209ENST00000627620 RBMY1A1P0DJD3 496 aaKnown RBP10.56□□□□□ -0.72
SCN8A-209ENST00000627620 RBMY1CP0DJD4 496 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 NYNRINQ9P2P1 1898 aaKnown RBP10.56□□□□□ -0.72
SCN8A-209ENST00000627620 TRGV11A0A075B6L2 103 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 C3orf36Q3SXR2 165 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 KLHDC3Q9BQ90 382 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 GREB1Q4ZG55 1949 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 IGHV1-3A0A0C4DH29 117 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 HBDP02042 147 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 C15orf32Q32M92 178 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 COQ2Q96H96 371 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 C1QL4Q86Z23 238 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 MBD3L1Q8WWY6 194 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 SELENOKQ9Y6D0 94 aa10.56□□□□□ -0.72
SCN8A-209ENST00000627620 FGF16O43320 207 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 CYSLTR1Q9Y271 337 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 EP300Q09472 2414 aaPredicted RBP10.55□□□□□ -0.72
SCN8A-209ENST00000627620 LINC00614P0C842 121 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 LHFPL1Q86WI0 220 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 CNOT1A5YKK6 2376 aaKnown RBP10.55□□□□□ -0.72
SCN8A-209ENST00000627620 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 TYMSP04818 313 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 EVI2AP22794 236 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 TPTE2P1Q5T6R2 138 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 TEX38Q6PEX7 206 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 NPIPB5A8MRT5 1133 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 PPBPP02775 128 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 GTSCR1Q86UQ5 136 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
SCN8A-209ENST00000627620 SPTBN2O15020 2390 aa10.55□□□□□ -0.72
SCN8A-209ENST00000627620 XIRP1Q702N8 1843 aaKnown RBP10.54□□□□□ -0.72
SCN8A-209ENST00000627620 A0A0G2JNJ9 132 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
SCN8A-209ENST00000627620 GNLYP22749 145 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 MDS2Q8NDY4 140 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 GGTLC1Q9BX51 225 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 SEPSECSQ9HD40 501 aaKnown RBP10.54□□□□□ -0.72
SCN8A-209ENST00000627620 Q9UFV3 132 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
SCN8A-209ENST00000627620 FAM166AQ6J272 317 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 PNRC2Q9NPJ4 139 aaKnown RBP10.54□□□□□ -0.72
SCN8A-209ENST00000627620 SPCS1Q9Y6A9 102 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 PMS2P5A8MQ11 134 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 PSG1P11464 419 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 C10orf126Q8N4M7 172 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 GSN-AS1Q9NRJ2 163 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 C5orf63A6NC05 138 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 ORMDL2Q53FV1 153 aa10.54□□□□□ -0.72
SCN8A-209ENST00000627620 IGKV2-40A0A087WW87 121 aaPredicted RBP10.53□□□□□ -0.72
SCN8A-209ENST00000627620 F2Z2F3 143 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 IGKV2D-40P01614 121 aaPredicted RBP10.53□□□□□ -0.72
SCN8A-209ENST00000627620 SPATA31B1PQ5VZV4 182 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 DOCK6Q96HP0 2047 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 NUDT10Q8NFP7 164 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms