RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 OR10G9Q8NGN4 311 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 OR10G7Q8NGN6 311 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 SFT2D1Q8WV19 159 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 BTBD17A6NE02 478 aa7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 SH2D7A6NKC9 451 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 LINC01548A6NM66 108 aa7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 EIF3GO75821 320 aaKnown RBP eCLIP7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 MT-CO2P00403 227 aa7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 RPL29P47914 159 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 B2MP61769 119 aa7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 CCL20P78556 96 aa7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 LY6EQ16553 131 aa7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 GCSAMLQ5JQS6 135 aa7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 MIC13Q5XKP0 118 aa7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 TTC9CQ8N5M4 171 aa7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-223ENST00000627587 IGKV1D-37A0A075B6S9 117 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 A0A1B0GV50 99 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 A6NDX4 124 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 M0QZK8 103 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 OR10J1P30954 320 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 RND2P52198 227 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 CTAG1AP78358 180 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 DEFA6Q01524 100 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 DEFB112Q30KQ8 113 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 TOR2AQ5JU69 321 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 C9orf139Q6ZV77 190 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 C16orf82Q7Z2V1 217 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 STPG3Q8N7X2 389 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 NPIPB3Q92617 1050 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 ACTR3CQ9C0K3 210 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 SLC39A9Q9NUM3 307 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 TRAV1-1A0A0B4J248 108 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 CTXND1A0A1B0GTU2 59 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 MAP1LC3B2A6NCE7 125 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 DNAJC9-AS1A6NH13 148 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 ZFP92A6NM28 416 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 I3L2K1 104 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 ATP6V0E1O15342 81 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 LINC00869P0C866 280 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 FAM122CQ6P4D5 195 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 LCN15Q6UWW0 184 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 THAP8Q8NA92 274 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 TMEM116Q8NCL8 245 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 MBD3L1Q8WWY6 194 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 TMEM68Q96MH6 324 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 FANCD2OSQ96PS1 177 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 PBDC1Q9BVG4 233 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 MAP1LC3BQ9GZQ8 125 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 SLC25A22Q9H936 323 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 THYN1Q9P016 225 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 SLC45A2Q9UMX9 530 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 PKD1L1Q8TDX9 2849 aa7.45□□□□□ -1.22
PDLIM5-223ENST00000627587 IGHV3-21A0A0B4J1V1 117 aa7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 A0A1W2PPV4 95 aa7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 C9JQL5 133 aa7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 CDC34P49427 236 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 ECSCRQ19T08 205 aa7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 SMUG1Q53HV7 270 aa7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 UNQ5815/PRO19632Q6UWF5 114 aa7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 CYP2G1PQ6ZSU1 146 aa7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 BPIFCQ8NFQ6 507 aa7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 NARS2Q96I59 477 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 ZNF48Q96MX3 618 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 TREM1Q9NP99 234 aa7.44□□□□□ -1.22
PDLIM5-223ENST00000627587 IGLV11-55A0A075B6I3 123 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 TCRBV4S1A1TA0A5B7 111 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 SEC14L6B5MCN3 397 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 KRBOX1C9JBD0 128 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 K7EIM0 57 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 GATA2P23769 480 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 SELENOTP62341 195 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 GUK1Q16774 197 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 AKIRIN2Q53H80 203 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 C19orf54Q5BKX5 351 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 C9orf152Q5JTZ5 239 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 OR5T1Q8NG75 326 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 OR5R1Q8NH85 324 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 FAM110DQ8TAY7 271 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 RAB24Q969Q5 203 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 LINC00052Q96N35 136 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 EIF5A2Q9GZV4 153 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 TMEM231Q9H6L2 316 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 PSMB11A5LHX3 300 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 IGHV4-59P01825 116 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 CD5P06127 495 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 HIST1H1BP16401 226 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 ZP3P21754 424 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 IER3P46695 156 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 FGF8P55075 233 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 Q6ZS46 218 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 OR4X1Q8NH49 305 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 TRGV9Q99603 122 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 PRDM13Q9H4Q3 707 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 TNFRSF19Q9NS68 423 aa7.43□□□□□ -1.22
PDLIM5-223ENST00000627587 F8W735 103 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 HMGB3O15347 200 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 ADCYAP1P18509 176 aa7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 RHOBP62745 196 aa7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 ZNF90Q03938 601 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms