RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 H7BYZ3 331 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 NPFFO15130 113 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 TGOLN2O43493 480 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 SAA4P35542 130 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 ATP5J2P56134 94 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 CX3CL1P78423 397 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 MORN5Q5VZ52 161 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 STXBP6Q8NFX7 210 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 SSX3Q99909 188 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 IGHV3-21A0A0B4J1V1 117 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 TRAV5A0A0B4J249 113 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 C9JCJ5 164 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 K7EIM0 57 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 IGLC1P0CG04 106 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 RPS10P46783 165 aaKnown RBP17.47■□□□□ 0.39
PNKP-220ENST00000627232 UBE2L3P68036 154 aaKnown RBP17.47■□□□□ 0.39
PNKP-220ENST00000627232 ZNF843Q8N446 348 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 TTC9CQ8N5M4 171 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 PAXXQ9BUH6 204 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 IGHV4-61A0A0C4DH41 118 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 HYPMO75409 117 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 FABP1P07148 127 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 PFN1P07737 140 aaKnown RBP17.46■□□□□ 0.39
PNKP-220ENST00000627232 OR10J4P0C629 311 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 LINC00305Q7Z4B0 112 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 C2CD4CQ8TF44 421 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 FAM210BQ96KR6 192 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 OR5B12Q96R08 314 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 OR51M1Q9H341 326 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 ACACBO00763 2458 aa17.46■□□□□ 0.39
PNKP-220ENST00000627232 PPP1R2P9O14990 202 aa17.45■□□□□ 0.38
PNKP-220ENST00000627232 S100PP25815 95 aa17.45■□□□□ 0.38
PNKP-220ENST00000627232 ASPHD1Q5U4P2 390 aa17.45■□□□□ 0.38
PNKP-220ENST00000627232 Q8N9W7 124 aa17.45■□□□□ 0.38
PNKP-220ENST00000627232 OR1B1Q8NGR6 318 aa17.45■□□□□ 0.38
PNKP-220ENST00000627232 FAM103A1Q9BTL3 118 aaKnown RBP17.45■□□□□ 0.38
PNKP-220ENST00000627232 TRBV20OR9-2A0A075B6H5 130 aa17.44■□□□□ 0.38
PNKP-220ENST00000627232 CENPVL3A0A0U1RRI6 287 aa17.44■□□□□ 0.38
PNKP-220ENST00000627232 HLA-DRB1P01911 266 aa17.44■□□□□ 0.38
PNKP-220ENST00000627232 PAX1P15863 534 aa17.44■□□□□ 0.38
PNKP-220ENST00000627232 ORM2P19652 201 aa17.44■□□□□ 0.38
PNKP-220ENST00000627232 DSCR9P59020 149 aa17.44■□□□□ 0.38
PNKP-220ENST00000627232 PYGO2Q9BRQ0 406 aa17.44■□□□□ 0.38
PNKP-220ENST00000627232 SAV1Q9H4B6 383 aaPredicted RBP17.44■□□□□ 0.38
PNKP-220ENST00000627232 IGLV11-55A0A075B6I3 123 aa17.43■□□□□ 0.38
PNKP-220ENST00000627232 SRP14P37108 136 aaKnown RBP17.43■□□□□ 0.38
PNKP-220ENST00000627232 GALR1P47211 349 aa17.43■□□□□ 0.38
PNKP-220ENST00000627232 FAM120AOSQ5T036 256 aa17.43■□□□□ 0.38
PNKP-220ENST00000627232 ZNF48Q96MX3 618 aaPredicted RBP17.43■□□□□ 0.38
PNKP-220ENST00000627232 RASL11BQ9BPW5 248 aa17.43■□□□□ 0.38
PNKP-220ENST00000627232 IGSF10Q6WRI0 2623 aa17.43■□□□□ 0.38
PNKP-220ENST00000627232 GGTLC3B5MD39 225 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 NDPQ00604 133 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 SMUG1Q53HV7 270 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 FXYD5Q96DB9 178 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 RBM14Q96PK6 669 aaKnown RBP17.42■□□□□ 0.38
PNKP-220ENST00000627232 CACNA1BQ00975 2339 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 TRAV30A0A087WSZ9 112 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 IGHV7-81A0A0B4J1V7 117 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 MDFIC2A0A1B0GVS7 189 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 PSG1P11464 419 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 CRYBB3P26998 211 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 RPL35P42766 123 aaKnown RBP17.42■□□□□ 0.38
PNKP-220ENST00000627232 SUMO1P63165 101 aaKnown RBP17.42■□□□□ 0.38
PNKP-220ENST00000627232 TIGITQ495A1 244 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 PIP4P2Q8N4L2 257 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 OR5T1Q8NG75 326 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 OCC1Q8TAD7 63 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 IMMP2LQ96T52 175 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 TCEAL7Q9BRU2 100 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 GSX1Q9H4S2 264 aaPredicted RBP17.42■□□□□ 0.38
PNKP-220ENST00000627232 HIGD1AQ9Y241 93 aa17.42■□□□□ 0.38
PNKP-220ENST00000627232 WNK2Q9Y3S1 2297 aa17.41■□□□□ 0.38
PNKP-220ENST00000627232 HELTA6NFD8 242 aa17.41■□□□□ 0.38
PNKP-220ENST00000627232 IGKV1-17P01599 117 aa17.41■□□□□ 0.38
PNKP-220ENST00000627232 S100A6P06703 90 aa17.41■□□□□ 0.38
PNKP-220ENST00000627232 PYYP10082 97 aa17.41■□□□□ 0.38
PNKP-220ENST00000627232 FANCD2OSQ96PS1 177 aa17.41■□□□□ 0.38
PNKP-220ENST00000627232 DOPEY1Q5JWR5 2465 aa17.4■□□□□ 0.38
PNKP-220ENST00000627232 IGHV4-30-2A0A087WSY4 118 aa17.4■□□□□ 0.38
PNKP-220ENST00000627232 IGHV1-69DA0A0B4J2H0 117 aa17.4■□□□□ 0.38
PNKP-220ENST00000627232 IGHV1-69P01742 117 aa17.4■□□□□ 0.38
PNKP-220ENST00000627232 SFRP2Q96HF1 295 aa17.4■□□□□ 0.38
PNKP-220ENST00000627232 THYN1Q9P016 225 aa17.4■□□□□ 0.38
PNKP-220ENST00000627232 PGPEP1LA6NFU8 196 aa17.39■□□□□ 0.37
PNKP-220ENST00000627232 C5orf52A6NGY3 159 aa17.39■□□□□ 0.37
PNKP-220ENST00000627232 TOMM40O96008 361 aa17.39■□□□□ 0.37
PNKP-220ENST00000627232 EGR2P11161 476 aaPredicted RBP17.39■□□□□ 0.37
PNKP-220ENST00000627232 COX6B1P14854 86 aa17.39■□□□□ 0.37
PNKP-220ENST00000627232 KCNIP4Q6PIL6 250 aa17.39■□□□□ 0.37
PNKP-220ENST00000627232 ELOVL1Q9BW60 279 aa17.39■□□□□ 0.37
PNKP-220ENST00000627232 GGCTO75223 188 aaKnown RBP17.38■□□□□ 0.37
PNKP-220ENST00000627232 RD3LP0DJH9 198 aa17.38■□□□□ 0.37
PNKP-220ENST00000627232 MFAP4P55083 255 aa17.38■□□□□ 0.37
PNKP-220ENST00000627232 LYZP61626 148 aa17.38■□□□□ 0.37
PNKP-220ENST00000627232 HIST1H1BP16401 226 aaKnown RBP17.37■□□□□ 0.37
PNKP-220ENST00000627232 GNG4P50150 75 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 YPEL3P61236 119 aaPredicted RBP17.37■□□□□ 0.37
PNKP-220ENST00000627232 KLK9Q2XQG4 91 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 KLF17Q5JT82 389 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms