RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 PRSS54Q6PEW0 395 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 LYZL2Q7Z4W2 148 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 LGI3Q8N145 548 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 TOMM5Q8N4H5 51 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 Q8WTZ3 238 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 RNF183Q96D59 192 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 NARS2Q96I59 477 aaKnown RBP8.01□□□□□ -1.13
SSBP4-215ENST00000625926 CSTL1Q9H114 145 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 MS4A6AQ9H2W1 248 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 PRR13Q9NZ81 148 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 DNAH1Q9P2D7 4330 aa8.01□□□□□ -1.13
SSBP4-215ENST00000625926 TRAV2A0A0B4J234 112 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 MPTX1A8MV57 137 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 IFNA10P01566 189 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 NPY1RP25929 384 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 CRYBB3P26998 211 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 RND2P52198 227 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 YPEL3P61236 119 aaPredicted RBP8□□□□□ -1.13
SSBP4-215ENST00000625926 SUPT4H1P63272 117 aaKnown RBP8□□□□□ -1.13
SSBP4-215ENST00000625926 TNFRSF9Q07011 255 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 SMCO1Q147U7 214 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 ZNF124Q15973 351 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 OR1S2Q8NGQ3 325 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 GRAMD2BQ96HH9 432 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 HSPB7Q9UBY9 170 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 U3KQ87 197 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 V9GYH0 126 aa8□□□□□ -1.13
SSBP4-215ENST00000625926 TENM2Q9NT68 2774 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 A0A0J9YWU9 116 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 JTBO76095 146 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 IGLC1P0CG04 106 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 OR10J1P30954 320 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 ATP5IP56385 69 aaPredicted RBP7.99□□□□□ -1.13
SSBP4-215ENST00000625926 TMEM128Q5BJH2 165 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 TMED4Q7Z7H5 227 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 LYG2Q86SG7 212 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 DTD1Q8TEA8 209 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 TMEM170AQ8WVE7 144 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 DEDD2Q8WXF8 326 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 TRIM63Q969Q1 353 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 SLC25A21Q9BQT8 299 aaPredicted RBP7.99□□□□□ -1.13
SSBP4-215ENST00000625926 RABAC1Q9UI14 185 aa7.99□□□□□ -1.13
SSBP4-215ENST00000625926 DUXBA0A1W2PPF3 345 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 ZNF701M0R085 212 aaPredicted RBP7.98□□□□□ -1.13
SSBP4-215ENST00000625926 P2RY1P47900 373 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 EIF2B2P49770 351 aaKnown RBP7.98□□□□□ -1.13
SSBP4-215ENST00000625926 DEFB131AP59861 70 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 RBMS2Q15434 407 aaKnown RBP7.98□□□□□ -1.13
SSBP4-215ENST00000625926 ZNF79Q15937 498 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 CCDC190Q86UF4 302 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 TMEM217Q8N7C4 229 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 OR1S1Q8NH92 325 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 GATAD1Q8WUU5 269 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 NPIPB3Q92617 1050 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 ACY3Q96HD9 319 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 RBKSQ9H477 322 aa7.98□□□□□ -1.13
SSBP4-215ENST00000625926 CXorf65A6NEN9 183 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 HELTA6NFD8 242 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 IFNA4P05014 189 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 HNRNPCP07910 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
SSBP4-215ENST00000625926 RD3LP0DJH9 198 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 ATF4P18848 351 aaPredicted RBP7.97□□□□□ -1.13
SSBP4-215ENST00000625926 VAMP1P23763 118 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 AP2S1P53680 142 aaPredicted RBP7.97□□□□□ -1.13
SSBP4-215ENST00000625926 LEMD1Q68G75 181 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 FAM24BQ8N5W8 94 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 LRTM2Q8N967 370 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 STXBP6Q8NFX7 210 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 RARRES2Q99969 163 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 RBM38Q9H0Z9 239 aaKnown RBP7.97□□□□□ -1.13
SSBP4-215ENST00000625926 U3KQE9 123 aa7.97□□□□□ -1.13
SSBP4-215ENST00000625926 K7EQG2 157 aa7.96□□□□□ -1.14
SSBP4-215ENST00000625926 TOMM40O96008 361 aa7.96□□□□□ -1.14
SSBP4-215ENST00000625926 IL4P05112 153 aa7.96□□□□□ -1.14
SSBP4-215ENST00000625926 GPX4P36969 197 aaPredicted RBP7.96□□□□□ -1.14
SSBP4-215ENST00000625926 PMS2P11Q13670 270 aa7.96□□□□□ -1.14
SSBP4-215ENST00000625926 SPANXN2Q5MJ10 180 aa7.96□□□□□ -1.14
SSBP4-215ENST00000625926 C16orf54Q6UWD8 224 aa7.96□□□□□ -1.14
SSBP4-215ENST00000625926 NUPR2A6NF83 97 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 PITX3O75364 302 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 SFT2D2O95562 160 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 CA1P00915 261 aaPredicted RBP7.95□□□□□ -1.14
SSBP4-215ENST00000625926 PSG1P11464 419 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 SLC25A6P12236 298 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 INPP1P49441 399 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 RAB11AP62491 216 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 EWSR1Q01844 656 aaKnown RBP eCLIP7.95□□□□□ -1.144e-7■■■■□ 21.5
SSBP4-215ENST00000625926 USF2Q15853 346 aaPredicted RBP7.95□□□□□ -1.14
SSBP4-215ENST00000625926 STHQ8IWL8 128 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 CENPSQ8N2Z9 138 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 DCANP1Q8TF63 244 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 TMED3Q9Y3Q3 217 aa7.95□□□□□ -1.14
SSBP4-215ENST00000625926 NAP1L6A6NFF2 107 aa7.94□□□□□ -1.14
SSBP4-215ENST00000625926 ZFP92A6NM28 416 aa7.94□□□□□ -1.14
SSBP4-215ENST00000625926 FAM90A26D6RGX4 464 aa7.94□□□□□ -1.14
SSBP4-215ENST00000625926 BUB3O43684 328 aa7.94□□□□□ -1.14
SSBP4-215ENST00000625926 MED6O75586 246 aa7.94□□□□□ -1.14
SSBP4-215ENST00000625926 FABP1P07148 127 aa7.94□□□□□ -1.14
SSBP4-215ENST00000625926 ZNF688P0C7X2 276 aa7.94□□□□□ -1.14
SSBP4-215ENST00000625926 RPP30P78346 268 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms