RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 IGKV1-9A0A0C4DH69 117 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 OR4E1P0C645 316 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 CYBAP13498 195 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 PDE6HQ13956 83 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 TEX36Q5VZQ5 186 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 PHF13Q86YI8 300 aaPredicted RBP1.16□□□□□ -2.22
CDR1-202ENST00000625883 OR8D4Q8NGM9 314 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 GPR146Q96CH1 333 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 KIFC1Q9BW19 673 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 TRABDQ9H4I3 376 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 RNF122Q9H9V4 155 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 NMNAT1Q9HAN9 279 aaPredicted RBP1.16□□□□□ -2.22
CDR1-202ENST00000625883 A0A087X0T9 212 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 FAM159BA6NKW6 160 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 C1orf196B1AJZ1 125 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 OR2B3O76000 313 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 CST2P09228 141 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 HSD11B1P28845 292 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 HOXA6P31267 233 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 SSR2P43308 183 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 SERPINB9P50453 376 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 LIN52Q52LA3 116 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 RNASE10Q5GAN6 216 aaKnown RBP1.15□□□□□ -2.23
CDR1-202ENST00000625883 OR11H6Q8NGC7 330 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 BTF3L4Q96K17 158 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 TMEM133Q9H2Q1 129 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 PARVBQ9HBI1 364 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 EPDR1Q9UM22 224 aa1.15□□□□□ -2.23
CDR1-202ENST00000625883 PCF11O94913 1555 aaKnown RBP1.15□□□□□ -2.23
CDR1-202ENST00000625883 KMT2BQ9UMN6 2715 aaPredicted RBP1.14□□□□□ -2.23
CDR1-202ENST00000625883 CLDN25C9JDP6 229 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 OR1I1O60431 355 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 UBL3O95164 117 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 BAALC-AS2P0C853 105 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 MGST1P10620 155 aaKnown RBP1.14□□□□□ -2.23
CDR1-202ENST00000625883 BRS3P32247 399 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 ANP32AP39687 249 aaKnown RBP1.14□□□□□ -2.23
CDR1-202ENST00000625883 CAPZBP47756 277 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 S100A7AQ86SG5 101 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 OR4C6Q8NH72 309 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 CHMP6Q96FZ7 201 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 ARL2BPQ9Y2Y0 163 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 RP1P56715 2156 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 INTS1Q8N201 2190 aaKnown RBP1.14□□□□□ -2.23
CDR1-202ENST00000625883 FBN3Q75N90 2809 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 ECM29Q5VYK3 1845 aa1.14□□□□□ -2.23
CDR1-202ENST00000625883 MED1Q15648 1581 aaPredicted RBP1.13□□□□□ -2.23
CDR1-202ENST00000625883 TRAV3A0A0B4J244 114 aa1.13□□□□□ -2.23
CDR1-202ENST00000625883 ATP5HO75947 161 aa1.13□□□□□ -2.23
CDR1-202ENST00000625883 LYZL6O75951 148 aa1.13□□□□□ -2.23
CDR1-202ENST00000625883 SERPINA1P01009 418 aa1.13□□□□□ -2.23
CDR1-202ENST00000625883 GNPDA2Q8TDQ7 276 aa1.13□□□□□ -2.23
CDR1-202ENST00000625883 FAM32AQ9Y421 112 aaKnown RBP1.13□□□□□ -2.23
CDR1-202ENST00000625883 ADGRL3Q9HAR2 1447 aa1.13□□□□□ -2.23
CDR1-202ENST00000625883 PLXND1Q9Y4D7 1925 aa1.13□□□□□ -2.23
CDR1-202ENST00000625883 FCGBPQ9Y6R7 5405 aaPredicted RBP1.13□□□□□ -2.23
CDR1-202ENST00000625883 TRAV4A0A0B4J268 109 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 IL9P15248 144 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 ERP29P30040 261 aaKnown RBP1.12□□□□□ -2.23
CDR1-202ENST00000625883 RNASE4P34096 147 aaKnown RBP1.12□□□□□ -2.23
CDR1-202ENST00000625883 CTAG1AP78358 180 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 MRPS15P82914 257 aaKnown RBP1.12□□□□□ -2.23
CDR1-202ENST00000625883 TSNQ15631 228 aaKnown RBP1.12□□□□□ -2.23
CDR1-202ENST00000625883 OR10X1Q8NGY0 326 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 OR10J5Q8NHC4 309 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 HIST1H2BLQ99880 126 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 ENY2Q9NPA8 101 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 HS3ST2Q9Y278 367 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 SNURFQ9Y675 71 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 ANAPC1Q9H1A4 1944 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 SCN10AQ9Y5Y9 1956 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 COL6A6A6NMZ7 2263 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 C7orf71A4D174 169 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 J3QRK9 145 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 CYB5BO43169 146 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 PIGPP57054 158 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 MRPS25P82663 173 aaKnown RBP1.12□□□□□ -2.23
CDR1-202ENST00000625883 RHOGP84095 191 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 PLCXD2Q0VAA5 305 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 BRMS1LQ5PSV4 323 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 STAG3L4Q8TBR4 150 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 C9orf16Q9BUW7 83 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 NHP2Q9NX24 153 aaKnown RBP1.12□□□□□ -2.23
CDR1-202ENST00000625883 SLC35A3Q9Y2D2 325 aa1.12□□□□□ -2.23
CDR1-202ENST00000625883 UTP11Q9Y3A2 253 aaKnown RBP1.12□□□□□ -2.23
CDR1-202ENST00000625883 ARFGEF3Q5TH69 2177 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 FLG2Q5D862 2391 aaPredicted RBP1.11□□□□□ -2.23
CDR1-202ENST00000625883 TRAV12-1A0A0B4J245 112 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 SULT1B1O43704 296 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 ATP5G3P48201 142 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 RAB4BP61018 213 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 RHOBP62745 196 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 DEFB113Q30KQ7 82 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 C3orf56Q8N813 242 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 FAM172AQ8WUF8 416 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 SFT2D1Q8WV19 159 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 OPTCQ9UBM4 332 aa1.11□□□□□ -2.23
CDR1-202ENST00000625883 MED12LQ86YW9 2145 aa1.1□□□□□ -2.23
CDR1-202ENST00000625883 DIDO1Q9BTC0 2240 aaKnown RBP1.1□□□□□ -2.23
CDR1-202ENST00000625883 ALPK2Q86TB3 2170 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms