RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 FUNDC2Q9BWH2 189 aa13.68□□□□□ -0.22
SMN1-211ENST00000625245 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.68□□□□□ -0.22
SMN1-211ENST00000625245 XCL2Q9UBD3 114 aa13.68□□□□□ -0.22
SMN1-211ENST00000625245 IGLC1P0CG04 106 aa13.67□□□□□ -0.22
SMN1-211ENST00000625245 RORCP51449 518 aa13.67□□□□□ -0.22
SMN1-211ENST00000625245 DHODHQ02127 395 aa13.67□□□□□ -0.22
SMN1-211ENST00000625245 PRSS54Q6PEW0 395 aa13.67□□□□□ -0.22
SMN1-211ENST00000625245 OR4D10Q8NGI6 311 aa13.67□□□□□ -0.22
SMN1-211ENST00000625245 TERB2Q8NHR7 220 aa13.67□□□□□ -0.22
SMN1-211ENST00000625245 MARCH1Q8TCQ1 289 aa13.67□□□□□ -0.22
SMN1-211ENST00000625245 GLMPQ8WWB7 406 aa13.67□□□□□ -0.22
SMN1-211ENST00000625245 KIAA1109Q2LD37 5005 aa13.66□□□□□ -0.22
SMN1-211ENST00000625245 TBPP20226 339 aa13.66□□□□□ -0.22
SMN1-211ENST00000625245 OR10J1P30954 320 aa13.66□□□□□ -0.22
SMN1-211ENST00000625245 SNRPD3P62318 126 aaKnown RBP13.66□□□□□ -0.22
SMN1-211ENST00000625245 C1QTNF4Q9BXJ3 329 aa13.66□□□□□ -0.22
SMN1-211ENST00000625245 EXTL2Q9UBQ6 330 aa13.66□□□□□ -0.22
SMN1-211ENST00000625245 MTFP1Q9UDX5 166 aa13.66□□□□□ -0.22
SMN1-211ENST00000625245 CEBPZOSA8MTT3 80 aa13.65□□□□□ -0.22
SMN1-211ENST00000625245 M0R2N4 97 aa13.65□□□□□ -0.22
SMN1-211ENST00000625245 RAB3DO95716 219 aa13.65□□□□□ -0.22
SMN1-211ENST00000625245 IL4P05112 153 aa13.65□□□□□ -0.22
SMN1-211ENST00000625245 OR5AC1P0C628 307 aa13.65□□□□□ -0.22
SMN1-211ENST00000625245 SLC25A4P12235 298 aa13.65□□□□□ -0.22
SMN1-211ENST00000625245 NPY1RP25929 384 aa13.65□□□□□ -0.22
SMN1-211ENST00000625245 YPEL3P61236 119 aaPredicted RBP13.65□□□□□ -0.22
SMN1-211ENST00000625245 NUTF2P61970 127 aaKnown RBP13.65□□□□□ -0.22
SMN1-211ENST00000625245 OR52E5Q8NH55 327 aa13.65□□□□□ -0.22
SMN1-211ENST00000625245 SCRT1Q9BWW7 348 aa13.65□□□□□ -0.22
SMN1-211ENST00000625245 TEX13DA0A0J9YY54 714 aaPredicted RBP13.64□□□□□ -0.23
SMN1-211ENST00000625245 FAM90A26D6RGX4 464 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 B3GALNT1O75752 331 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 TNFAIP8O95379 198 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 AMBPP02760 352 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 P0DMU3 169 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 FAM231AP0DMU4 169 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 FAM231CP0DMU5 169 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 USF2Q15853 346 aaPredicted RBP13.64□□□□□ -0.23
SMN1-211ENST00000625245 C2orf83Q53S99 150 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 FAM219AQ8IW50 185 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 POM121L12Q8N7R1 296 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 TMEM229BQ8NBD8 167 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 SLC24A4Q8NFF2 622 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 RNASEH2CQ8TDP1 164 aaKnown RBP13.64□□□□□ -0.23
SMN1-211ENST00000625245 ABHD1Q96SE0 405 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 NDUFAF3Q9BU61 184 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 TMEM222Q9H0R3 208 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 CACNG5Q9UF02 275 aa13.64□□□□□ -0.23
SMN1-211ENST00000625245 C14orf166Q9Y224 244 aaKnown RBP13.64□□□□□ -0.23
SMN1-211ENST00000625245 H3BMM0 161 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 NXPH3O95157 252 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 CDS2O95674 445 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 TAS2R19P59542 299 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 ETFRF1Q6IPR1 90 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 SIGLEC15Q6ZMC9 328 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 SELENOHQ8IZQ5 122 aaKnown RBP13.63□□□□□ -0.23
SMN1-211ENST00000625245 LHFPL5Q8TAF8 219 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 NPIPB3Q92617 1050 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 GPR146Q96CH1 333 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 ACY3Q96HD9 319 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 NRN1Q9NPD7 142 aa13.63□□□□□ -0.23
SMN1-211ENST00000625245 CD74P04233 296 aa13.62□□□□□ -0.23
SMN1-211ENST00000625245 RD3LP0DJH9 198 aa13.62□□□□□ -0.23
SMN1-211ENST00000625245 EMP1P54849 157 aa13.62□□□□□ -0.23
SMN1-211ENST00000625245 MEF2DQ14814 521 aa13.62□□□□□ -0.23
SMN1-211ENST00000625245 AARDQ4LEZ3 155 aa13.62□□□□□ -0.23
SMN1-211ENST00000625245 STEAP1BQ6NZ63 245 aa13.62□□□□□ -0.23
SMN1-211ENST00000625245 GLYATL2Q8WU03 294 aa13.62□□□□□ -0.23
SMN1-211ENST00000625245 AP3S1Q92572 193 aa13.62□□□□□ -0.23
SMN1-211ENST00000625245 RBPMSQ93062 196 aaKnown RBP13.62□□□□□ -0.23
SMN1-211ENST00000625245 PCLOQ9Y6V0 5065 aa13.61□□□□□ -0.23
SMN1-211ENST00000625245 A0A1B0GVY2 172 aa13.61□□□□□ -0.23
SMN1-211ENST00000625245 PRSS29PA6NIE9 313 aa13.61□□□□□ -0.23
SMN1-211ENST00000625245 GSTZ1O43708 216 aaPredicted RBP13.61□□□□□ -0.23
SMN1-211ENST00000625245 IGKV3-20P01619 116 aa13.61□□□□□ -0.23
SMN1-211ENST00000625245 FXYD7P58549 80 aa13.61□□□□□ -0.23
SMN1-211ENST00000625245 FAAP20Q6NZ36 180 aa13.61□□□□□ -0.23
SMN1-211ENST00000625245 TMEM170AQ8WVE7 144 aa13.61□□□□□ -0.23
SMN1-211ENST00000625245 RTBDNQ9BSG5 229 aaPredicted RBP13.61□□□□□ -0.23
SMN1-211ENST00000625245 NAA60Q9H7X0 242 aa13.61□□□□□ -0.23
SMN1-211ENST00000625245 IGHV3OR16-12A0A075B7B8 117 aa13.6□□□□□ -0.23
SMN1-211ENST00000625245 BUB3O43684 328 aa13.6□□□□□ -0.23
SMN1-211ENST00000625245 TOMM40O96008 361 aa13.6□□□□□ -0.23
SMN1-211ENST00000625245 ZNF182P17025 639 aaPredicted RBP13.6□□□□□ -0.23
SMN1-211ENST00000625245 TMEM268Q5VZI3 342 aa13.6□□□□□ -0.23
SMN1-211ENST00000625245 OR51G1Q8NGK1 321 aa13.6□□□□□ -0.23
SMN1-211ENST00000625245 C15orf40Q8WUR7 153 aa13.6□□□□□ -0.23
SMN1-211ENST00000625245 SEPSECSQ9HD40 501 aaKnown RBP13.6□□□□□ -0.23
SMN1-211ENST00000625245 IFNA10P01566 189 aa13.59□□□□□ -0.23
SMN1-211ENST00000625245 SPART-AS1P0CW21 52 aa13.59□□□□□ -0.23
SMN1-211ENST00000625245 PSG1P11464 419 aa13.59□□□□□ -0.23
SMN1-211ENST00000625245 HLA-DRB4P13762 266 aa13.59□□□□□ -0.23
SMN1-211ENST00000625245 NOXA1Q86UR1 476 aa13.59□□□□□ -0.23
SMN1-211ENST00000625245 LINC00052Q96N35 136 aa13.59□□□□□ -0.23
SMN1-211ENST00000625245 PBDC1Q9BVG4 233 aa13.59□□□□□ -0.23
SMN1-211ENST00000625245 NAA50Q9GZZ1 169 aaKnown RBP13.59□□□□□ -0.23
SMN1-211ENST00000625245 HLA-DRB4X5D2U9 266 aa13.59□□□□□ -0.23
SMN1-211ENST00000625245 MUC4Q99102 2169 aa13.59□□□□□ -0.23
SMN1-211ENST00000625245 DNAH17Q9UFH2 4485 aa13.58□□□□□ -0.24
SMN1-211ENST00000625245 GABARAPH6UMI1 98 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms